Deciphering flavivirus-host interactions using quantitative proteomics

by Li, Minghua, Ramage, Holly, Cherry, Sara
Published in Curr Opin Immunol (2020)

Comprehensive Functional Analysis of Mycobacterium tuberculosis Toxin-Antitoxin Systems: Implications for Pathogenesis, Stress Responses, and Evolution

by Ramage, Holly R., Connolly, Lynn E., Cox, Jeffery S.
Published 2009

Rabies virus-based COVID-19 vaccine CORAVAX™ induces high levels of neutralizing antibodies against SARS-CoV-2

by Kurup, Drishya, Wirblich, Christoph, Ramage, Holly, Schnell, Matthias J.
Published in NPJ Vaccines (2020)

Diacylglycerol Acyltransferase-1 Localizes Hepatitis C Virus NS5A Protein to Lipid Droplets and Enhances NS5A Interaction with the Viral Capsid Core

by Camus, Gregory, Herker, Eva, Modi, Ankit A., Haas, Joel T., Ramage, Holly R., Farese, Robert V., Ott, Melanie
Published 2013

SARS-CoV-2 viral proteins NSP1 and NSP13 inhibit interferon activation through distinct mechanisms

by Vazquez, Christine, Swanson, Sydnie E., Negatu, Seble G., Dittmar, Mark, Miller, Jesse, Ramage, Holly R., Cherry, Sara, Jurado, Kellie A.
Published in PLoS One (2021)

Controllable protein phase separation and modular recruitment to form responsive membraneless organelles

by Schuster, Benjamin S., Reed, Ellen H., Parthasarathy, Ranganath, Jahnke, Craig N., Caldwell, Reese M., Bermudez, Jessica G., Ramage, Holly, Good, Matthew C., Hammer, Daniel A.
Published in Nat Commun (2018)

A Combined Proteomics/Genomics Approach Links Hepatitis C Virus Infection with Nonsense-Mediated mRNA Decay

by Ramage, Holly R., Kumar, G. Renuka, Verschueren, Erik, Johnson, Jeffrey R., Von Dollen, John, Johnson, Tasha, Newton, Billy, Shah, Priya, Horner, Julie, Krogan, Nevan J., Ott, Melanie
Published in Mol Cell (2015)

Identification of Antiviral Roles for the Exon-Junction Complex and Nonsense-Mediated Decay in Flaviviral Infection

by Li, Minghua, Johnson, Jeffrey R., Truong, Billy, Kim, Grace, Weinbren, Nathan, Dittmar, Mark, Shah, Priya S., Von Dollen, John, Newton, Billy W., Jang, Gwendolyn M., Krogan, Nevan J., Cherry, Sara, Ramage, Holly
Published in Nat Microbiol (2019)

The HIV-1 Tat Protein Is Monomethylated at Lysine 71 by the Lysine Methyltransferase KMT7

by Ali, Ibraheem, Ramage, Holly, Boehm, Daniela, Dirk, Lynnette M. A., Sakane, Naoki, Hanada, Kazuki, Pagans, Sara, Kaehlcke, Katrin, Aull, Katherine, Weinberger, Leor, Trievel, Raymond, Schnoelzer, Martina, Kamada, Masafumi, Houtz, Robert, Ott, Melanie
Published in J Biol Chem (2016)

A CRISPR screen defines a signal peptide processing pathway required by flaviviruses

by Zhang, Rong, Miner, Jonathan J., Gorman, Matthew J., Rausch, Keiko, Ramage, Holly, White, James P., Zuiani, Adam, Zhang, Ping, Fernandez, Estefania, Zhang, Qiang, Dowd, Kimberly A., Pierson, Theodore C., Cherry, Sara, Diamond, Michael S.
Published in Nature (2016)

Drug repurposing screens reveal cell-type-specific entry pathways and FDA-approved drugs active against SARS-Cov-2

by Dittmar, Mark, Lee, Jae Seung, Whig, Kanupriya, Segrist, Elisha, Li, Minghua, Kamalia, Brinda, Castellana, Lauren, Ayyanathan, Kasirajan, Cardenas-Diaz, Fabian L., Morrisey, Edward E., Truitt, Rachel, Yang, Wenli, Jurado, Kellie, Samby, Kirandeep, Ramage, Holly, Schultz, David C., Cherry, Sara
Published in Cell Rep (2021)

Targeting the Coronavirus Nucleocapsid Protein through GSK-3 Inhibition

by Liu, Xiaolei, Verma, Anurag, Garcia, Gustavo, Ramage, Holly, Myers, Rebecca L., Lucas, Anastasia, Michaelson, Jacob J., Coryell, William, Kumar, Arvind, Charney, Alexander W., Kazanietz, Marcelo G., Rader, Daniel J, Ritchie, Marylyn D, Berrettini, Wade H., Schultz, David C., Cherry, Sara, Damoiseaux, Robert, Arumugaswami, Vaithilingaraja, Klein, Peter S.
Published in medRxiv (2021)

Envelope Protein Ubiquitination Drives Zika Virus Entry and Pathogenesis

by Giraldo, Maria I., Xia, Hongjie, Aguilera-Aguirre, Leopoldo, Hage, Adam, van Tol, Sarah, Shan, Chao, Xie, Xuping, Sturdevant, Gail L., Robertson, Shelly J., McNally, Kristin L., Meade-White, Kimberly, Azar, Sasha R., Rossi, Shannan L., Maury, Wendy, Woodson, Michael, Ramage, Holly, Johnson, Jeffrey R., Krogan, Nevan J., Morais, Marc C., Best, Sonja M., Shi, Pei-Yong, Rajsbaum, Ricardo
Published in Nature (2020)

Comparative flavivirus-host protein interaction mapping reveals mechanisms of dengue and Zika virus pathogenesis

by Shah, Priya S., Link, Nichole, Jang, Gwendolyn M., Sharp, Phillip P., Zhu, Tongtong, Swaney, Danielle L., Johnson, Jeffrey R., Von Dollen, John, Ramage, Holly R., Satkamp, Laura, Newton, Billy, Aguirre, Sebastian, Hüttenhain, Ruth, Petit, Marine J., Baum, Tierney, Everitt, Amanda, Laufman, Orly, Tassetto, Michel, Shales, Michael, Stevenson, Erica, Iglesias, Gabriel N., Shokat, Leila, Tripathi, Shashank, Balasubramaniam, Vinod, Webb, Laurence G., Willsey, A. Jeremy, Garcia-Sastre, Adolfo, Pollard, Katherine S., Cherry, Sara, Gamarnik, Andrea V., Marazzi, Ivan, Taunton, Jack, Fernandez-Sesma, Ana, Bellen, Hugo J., Andino, Raul, Krogan, Nevan J.
Published in Cell (2018)

Seasonal human coronavirus antibodies are boosted upon SARS-CoV-2 infection but not associated with protection

by Anderson, Elizabeth M., Goodwin, Eileen C., Verma, Anurag, Arevalo, Claudia P., Bolton, Marcus J., Weirick, Madison E., Gouma, Sigrid, McAllister, Christopher M., Christensen, Shannon R., Weaver, JoEllen, Hicks, Phillip, Manzoni, Tomaz B., Oniyide, Oluwatosin, Ramage, Holly, Mathew, Divij, Baxter, Amy E., Oldridge, Derek A., Greenplate, Allison R., Wu, Jennifer E., Alanio, Cécile, D’Andrea, Kurt, Kuthuru, Oliva, Dougherty, Jeanette, Pattekar, Ajinkya, Kim, Justin, Han, Nicholas, Apostolidis, Sokratis A., Huang, Alex C., Vella, Laura A., Wherry, E. John, Meyer, Nuala J., Cherry, Sara, Bates, Paul, Rader, Daniel J., Hensley, Scott E.
Published in medRxiv (2020)

Seasonal human coronavirus antibodies are boosted upon SARS-CoV-2 infection but not associated with protection

by Anderson, Elizabeth M., Goodwin, Eileen C., Verma, Anurag, Arevalo, Claudia P., Bolton, Marcus J., Weirick, Madison E., Gouma, Sigrid, McAllister, Christopher M., Christensen, Shannon R., Weaver, JoEllen, Hicks, Philip, Manzoni, Tomaz B., Oniyide, Oluwatosin, Ramage, Holly, Mathew, Divij, Baxter, Amy E., Oldridge, Derek A., Greenplate, Allison R., Wu, Jennifer E., Alanio, Cécile, D’Andrea, Kurt, Kuthuru, Oliva, Dougherty, Jeanette, Pattekar, Ajinkya, Kim, Justin, Han, Nicholas, Apostolidis, Sokratis A., Huang, Alex C., Vella, Laura A., Kuri-Cervantes, Leticia, Pampena, M. Betina, Betts, Michael R., Wherry, E. John, Meyer, Nuala J., Cherry, Sara, Bates, Paul, Rader, Daniel J., Hensley, Scott E.
Published in Cell (2021)

Deep immune profiling of COVID-19 patients reveals distinct immunotypes with therapeutic implications

by Mathew, Divij, Giles, Josephine R., Baxter, Amy E., Oldridge, Derek A., Greenplate, Allison R., Wu, Jennifer E., Alanio, Cécile, Kuri-Cervantes, Leticia, Pampena, M. Betina, D’Andrea, Kurt, Manne, Sasikanth, Chen, Zeyu, Huang, Yinghui Jane, Reilly, John P., Weisman, Ariel R., Ittner, Caroline A. G., Kuthuru, Oliva, Dougherty, Jeanette, Nzingha, Kito, Han, Nicholas, Kim, Justin, Pattekar, Ajinkya, Goodwin, Eileen C., Anderson, Elizabeth M., Weirick, Madison E., Gouma, Sigrid, Arevalo, Claudia P., Bolton, Marcus J., Chen, Fang, Lacey, Simon F., Ramage, Holly, Cherry, Sara, Hensley, Scott E., Apostolidis, Sokratis A., Huang, Alexander C., Vella, Laura A., Betts, Michael R., Meyer, Nuala J., Wherry, E. John
Published in Science (2020)