MetaMeta: integrating metagenome analysis tools to improve taxonomic profiling

av Piro, Vitor C., Matschkowski, Marcel, Renard, Bernhard Y.
I publikationen Microbiome (2017)

SuRankCo: supervised ranking of contigs in de novo assemblies

av Kuhring, Mathias, Dabrowski, Piotr Wojtek, Piro, Vitor C., Nitsche, Andreas, Renard, Bernhard Y.
I publikationen BMC Bioinformatics (2015)

ganon: precise metagenomics classification against large and up-to-date sets of reference sequences

av Piro, Vitor C, Dadi, Temesgen H, Seiler, Enrico, Reinert, Knut, Renard, Bernhard Y
I publikationen Bioinformatics (2020)

FGAP: an automated gap closing tool

av Piro, Vitor C, Faoro, Helisson, Weiss, Vinicius A, Steffens, Maria BR, Pedrosa, Fabio O, Souza, Emanuel M, Raittz, Roberto T
Publicerad 2014

gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms

av Muñoz-Benavent, Maria, Hartkopf, Felix, Van Den Bossche, Tim, Piro, Vitor C, García-Ferris, Carlos, Latorre, Amparo, Renard, Bernhard Y, Muth, Thilo
I publikationen NAR Genom Bioinform (2020)

gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms

av Muñoz-Benavent, Maria, Hartkopf, Felix, Van Den Bossche, Tim, Piro, Vitor C, García-Ferris, Carlos, Latorre, Amparo, Renard, Bernhard Y, Muth, Thilo
I publikationen NAR Genom Bioinform (2020)

Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water

av de Souza, Vanely, Piro, Vitor C., Faoro, Helisson, Tadra-Sfeir, Michelle Z., Chicora, Vanessa K., Guizelini, Dieval, Weiss, Vinicius, Vialle, Ricardo A., Monteiro, Rose A., Steffens, Maria Berenice R., Marchaukoski, Jeroniza N., Pedrosa, Fabio O., Cruz, Leonardo M., Chubatsu, Leda S., Raittz, Roberto T.
Publicerad 2013

Critical Assessment of Metagenome Interpretation – a benchmark of computational metagenomics software

av Sczyrba, Alexander, Hofmann, Peter, Belmann, Peter, Koslicki, David, Janssen, Stefan, Dröge, Johannes, Gregor, Ivan, Majda, Stephan, Fiedler, Jessika, Dahms, Eik, Bremges, Andreas, Fritz, Adrian, Garrido-Oter, Ruben, Jørgensen, Tue Sparholt, Shapiro, Nicole, Blood, Philip D., Gurevich, Alexey, Bai, Yang, Turaev, Dmitrij, DeMaere, Matthew Z., Chikhi, Rayan, Nagarajan, Niranjan, Quince, Christopher, Meyer, Fernando, Balvočiūtė, Monika, Hansen, Lars Hestbjerg, Sørensen, Søren J., Chia, Burton K. H., Denis, Bertrand, Froula, Jeff L., Wang, Zhong, Egan, Robert, Kang, Dongwan Don, Cook, Jeffrey J., Deltel, Charles, Beckstette, Michael, Lemaitre, Claire, Peterlongo, Pierre, Rizk, Guillaume, Lavenier, Dominique, Wu, Yu-Wei, Singer, Steven W., Jain, Chirag, Strous, Marc, Klingenberg, Heiner, Meinicke, Peter, Barton, Michael, Lingner, Thomas, Lin, Hsin-Hung, Liao, Yu-Chieh, Silva, Genivaldo Gueiros Z., Cuevas, Daniel A., Edwards, Robert A., Saha, Surya, Piro, Vitor C., Renard, Bernhard Y., Pop, Mihai, Klenk, Hans-Peter, Göker, Markus, Kyrpides, Nikos C., Woyke, Tanja, Vorholt, Julia A., Schulze-Lefert, Paul, Rubin, Edward M., Darling, Aaron E., Rattei, Thomas, McHardy, Alice C.
I publikationen Nat Methods (2017)