MetaMeta: integrating metagenome analysis tools to improve taxonomic profiling

著者: Piro, Vitor C., Matschkowski, Marcel, Renard, Bernhard Y.
出版年 Microbiome (2017)

SuRankCo: supervised ranking of contigs in de novo assemblies

著者: Kuhring, Mathias, Dabrowski, Piotr Wojtek, Piro, Vitor C., Nitsche, Andreas, Renard, Bernhard Y.
出版年 BMC Bioinformatics (2015)

ganon: precise metagenomics classification against large and up-to-date sets of reference sequences

著者: Piro, Vitor C, Dadi, Temesgen H, Seiler, Enrico, Reinert, Knut, Renard, Bernhard Y
出版年 Bioinformatics (2020)

FGAP: an automated gap closing tool

著者: Piro, Vitor C, Faoro, Helisson, Weiss, Vinicius A, Steffens, Maria BR, Pedrosa, Fabio O, Souza, Emanuel M, Raittz, Roberto T
出版事項 2014

gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms

著者: Muñoz-Benavent, Maria, Hartkopf, Felix, Van Den Bossche, Tim, Piro, Vitor C, García-Ferris, Carlos, Latorre, Amparo, Renard, Bernhard Y, Muth, Thilo
出版年 NAR Genom Bioinform (2020)

gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms

著者: Muñoz-Benavent, Maria, Hartkopf, Felix, Van Den Bossche, Tim, Piro, Vitor C, García-Ferris, Carlos, Latorre, Amparo, Renard, Bernhard Y, Muth, Thilo
出版年 NAR Genom Bioinform (2020)

Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water

著者: de Souza, Vanely, Piro, Vitor C., Faoro, Helisson, Tadra-Sfeir, Michelle Z., Chicora, Vanessa K., Guizelini, Dieval, Weiss, Vinicius, Vialle, Ricardo A., Monteiro, Rose A., Steffens, Maria Berenice R., Marchaukoski, Jeroniza N., Pedrosa, Fabio O., Cruz, Leonardo M., Chubatsu, Leda S., Raittz, Roberto T.
出版事項 2013

Critical Assessment of Metagenome Interpretation – a benchmark of computational metagenomics software

著者: Sczyrba, Alexander, Hofmann, Peter, Belmann, Peter, Koslicki, David, Janssen, Stefan, Dröge, Johannes, Gregor, Ivan, Majda, Stephan, Fiedler, Jessika, Dahms, Eik, Bremges, Andreas, Fritz, Adrian, Garrido-Oter, Ruben, Jørgensen, Tue Sparholt, Shapiro, Nicole, Blood, Philip D., Gurevich, Alexey, Bai, Yang, Turaev, Dmitrij, DeMaere, Matthew Z., Chikhi, Rayan, Nagarajan, Niranjan, Quince, Christopher, Meyer, Fernando, Balvočiūtė, Monika, Hansen, Lars Hestbjerg, Sørensen, Søren J., Chia, Burton K. H., Denis, Bertrand, Froula, Jeff L., Wang, Zhong, Egan, Robert, Kang, Dongwan Don, Cook, Jeffrey J., Deltel, Charles, Beckstette, Michael, Lemaitre, Claire, Peterlongo, Pierre, Rizk, Guillaume, Lavenier, Dominique, Wu, Yu-Wei, Singer, Steven W., Jain, Chirag, Strous, Marc, Klingenberg, Heiner, Meinicke, Peter, Barton, Michael, Lingner, Thomas, Lin, Hsin-Hung, Liao, Yu-Chieh, Silva, Genivaldo Gueiros Z., Cuevas, Daniel A., Edwards, Robert A., Saha, Surya, Piro, Vitor C., Renard, Bernhard Y., Pop, Mihai, Klenk, Hans-Peter, Göker, Markus, Kyrpides, Nikos C., Woyke, Tanja, Vorholt, Julia A., Schulze-Lefert, Paul, Rubin, Edward M., Darling, Aaron E., Rattei, Thomas, McHardy, Alice C.
出版年 Nat Methods (2017)