Messina: A Novel Analysis Tool to Identify Biologically Relevant Molecules in Disease

di Pinese, Mark, Scarlett, Christopher J., Kench, James G., Colvin, Emily K., Segara, Davendra, Henshall, Susan M., Sutherland, Robert L., Biankin, Andrew V.
Pubblicazione 2009

PINA v2.0: mining interactome modules

di Cowley, Mark J., Pinese, Mark, Kassahn, Karin S., Waddell, Nic, Pearson, John V., Grimmond, Sean M., Biankin, Andrew V., Hautaniemi, Sampsa, Wu, Jianmin
Pubblicazione 2012

The pseudokinase SgK223 promotes invasion of pancreatic ductal epithelial cells through JAK1/Stat3 signaling

di Tactacan, Carole M., Phua, Yu Wei, Liu, Ling, Zhang, Luxi, Humphrey, Emily S., Cowley, Mark, Pinese, Mark, Biankin, Andrew V., Daly, Roger J.
Pubblicato in Mol Cancer (2015)

Identification of novel sarcoma risk genes using a two-stage genome wide DNA sequencing strategy in cancer cluster families and population case and control cohorts

di Jones, Rachel M., Melton, Phillip E., Pinese, Mark, Rea, Alexander J., Ingley, Evan, Ballinger, Mandy L., Wood, David J., Thomas, David M., Moses, Eric K.
Pubblicato in BMC Med Genet (2019)

The Medical Genome Reference Bank: a whole-genome data resource of 4000 healthy elderly individuals. Rationale and cohort design

di Lacaze, Paul, Pinese, Mark, Kaplan, Warren, Stone, Andrew, Brion, Marie-Jo, Woods, Robyn L., McNamara, Martin, McNeil, John J., Dinger, Marcel E., Thomas, David M.
Pubblicato in Eur J Hum Genet (2018)

Defining the genetic basis of early onset hereditary spastic paraplegia using whole genome sequencing

di Kumar, Kishore R, Wali, G.M., Kamate, Mahesh, Wali, Gautam, Minoche, André E, Puttick, Clare, Pinese, Mark, Gayevskiy, Velimir, Dinger, Marcel E, Roscioli, Tony, Sue, Carolyn M., Cowley, Mark J
Pubblicato in Neurogenetics (2016)

ClinSV: clinical grade structural and copy number variant detection from whole genome sequencing data

di Minoche, Andre E., Lundie, Ben, Peters, Greg B., Ohnesorg, Thomas, Pinese, Mark, Thomas, David M., Zankl, Andreas, Roscioli, Tony, Schonrock, Nicole, Kummerfeld, Sarah, Burnett, Leslie, Dinger, Marcel E., Cowley, Mark J.
Pubblicato in Genome Med (2021)

Recruitment and Activation of Pancreatic Stellate Cells from the Bone Marrow in Pancreatic Cancer: A Model of Tumor-Host Interaction

di Scarlett, Christopher J., Colvin, Emily K., Pinese, Mark, Chang, David K., Morey, Adrienne L., Musgrove, Elizabeth A., Pajic, Marina, Apte, Minoti, Henshall, Susan M., Sutherland, Robert L., Kench, James G., Biankin, Andrew V.
Pubblicazione 2011

Profiling the tyrosine phosphoproteome of different mouse mammary tumour models reveals distinct, model-specific signalling networks and conserved oncogenic pathways

di Ali, Naveid A, Wu, Jianmin, Hochgräfe, Falko, Chan, Howard, Nair, Radhika, Ye, Sunny, Zhang, Luxi, Lyons, Ruth J, Pinese, Mark, Lee, Hong Ching, Armstrong, Nicola, Ormandy, Christopher J, Clark, Susan J, Swarbrick, Alexander, Daly, Roger J
Pubblicato in Breast Cancer Res (2014)

Identification of Functional Networks of Estrogen- and c-Myc-Responsive Genes and Their Relationship to Response to Tamoxifen Therapy in Breast Cancer

di Musgrove, Elizabeth A., Sergio, C. Marcelo, Loi, Sherene, Inman, Claire K., Anderson, Luke R., Alles, M. Chehani, Pinese, Mark, Caldon, C. Elizabeth, Schütte, Judith, Gardiner-Garden, Margaret, Ormandy, Christopher J., McArthur, Grant, Butt, Alison J., Sutherland, Robert L.
Pubblicazione 2008

BAMLET kills chemotherapy-resistant mesothelioma cells, holding oleic acid in an activated cytotoxic state

di Rath, Emma M., Cheng, Yuen Yee, Pinese, Mark, Sarun, Kadir H., Hudson, Amanda L., Weir, Christopher, Wang, Yiwei D., Håkansson, Anders P., Howell, Viive M., Liu, Guo Jun, Reid, Glen, Knott, Robert B., Duff, Anthony P., Church, W. Bret
Pubblicato in PLoS One (2018)

Adar3 Is Involved in Learning and Memory in Mice

di Mladenova, Dessislava, Barry, Guy, Konen, Lyndsey M., Pineda, Sandy S., Guennewig, Boris, Avesson, Lotta, Zinn, Raphael, Schonrock, Nicole, Bitar, Maina, Jonkhout, Nicky, Crumlish, Lauren, Kaczorowski, Dominik C., Gong, Andrew, Pinese, Mark, Franco, Gloria R., Walkley, Carl R., Vissel, Bryce, Mattick, John S.
Pubblicato in Front Neurosci (2018)

Retinoid Signaling in Pancreatic Cancer, Injury and Regeneration

di Colvin, Emily K., Susanto, Johana M., Kench, James G., Ong, Vivienna N., Mawson, Amanda, Pinese, Mark, Chang, David K., Rooman, Ilse, O'Toole, Sandra A., Segara, Davendra, Musgrove, Elizabeth A., Sutherland, Robert L., Apte, Minoti V., Scarlett, Christopher J., Biankin, Andrew V.
Pubblicazione 2011

Brief Report: Potent clinical and radiological response to larotrectinib in TRK fusion-driven high-grade glioma

di Ziegler, David S., Wong, Marie, Mayoh, Chelsea, Kumar, Amit, Tsoli, Maria, Mould, Emily, Tyrrell, Vanessa, Khuong-Quang, Dong-Anh, Pinese, Mark, Gayevskiy, Velimir, Cohn, Richard J., Lau, Loretta M. S., Reynolds, Mark, Cox, Michael C., Gifford, Andrew, Rodriguez, Michael, Cowley, Mark J., Ekert, Paul G., Marshall, Glenn M., Haber, Michelle
Pubblicato in Br J Cancer (2018)

Mitochondrial mutations and metabolic adaptation in pancreatic cancer

di Hardie, Rae-Anne, van Dam, Ellen, Cowley, Mark, Han, Ting-Li, Balaban, Seher, Pajic, Marina, Pinese, Mark, Iconomou, Mary, Shearer, Robert F., McKenna, Jessie, Miller, David, Waddell, Nicola, Pearson, John V., Grimmond, Sean M., Sazanov, Leonid, Biankin, Andrew V., Villas-Boas, Silas, Hoy, Andrew J., Turner, Nigel, Saunders, Darren N.
Pubblicato in Cancer Metab (2017)

Recurrent SPECC1L–NTRK fusions in pediatric sarcoma and brain tumors

di Khuong-Quang, Dong-Anh, Brown, Lauren M., Wong, Marie, Mayoh, Chelsea, Sexton-Oates, Alexandra, Kumar, Amit, Pinese, Mark, Nagabushan, Sumanth, Lau, Loretta, Ludlow, Louise E., Gifford, Andrew J., Rodriguez, Michael, Desai, Jayesh, Fox, Stephen B., Haber, Michelle, Ziegler, David S., Hansford, Jordan R., Marshall, Glenn M., Cowley, Mark J., Ekert, Paul G.
Pubblicato in Cold Spring Harb Mol Case Stud (2020)

qpure: A Tool to Estimate Tumor Cellularity from Genome-Wide Single-Nucleotide Polymorphism Profiles

di Song, Sarah, Nones, Katia, Miller, David, Harliwong, Ivon, Kassahn, Karin S., Pinese, Mark, Pajic, Marina, Gill, Anthony J., Johns, Amber L., Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Qinying, Newell, Felicity, Cowley, Mark J., Wu, Jianmin, Wilson, Peter, Fink, Lynn, Biankin, Andrew V., Waddell, Nic, Grimmond, Sean M., Pearson, John V.
Pubblicazione 2012

Integration of genomics, high throughput drug screening, and personalized xenograft models as a novel precision medicine paradigm for high risk pediatric cancer

di Tsoli, Maria, Wadham, Carol, Pinese, Mark, Failes, Tim, Joshi, Swapna, Mould, Emily, Yin, Julia X., Gayevskiy, Velimir, Kumar, Amit, Kaplan, Warren, Ekert, Paul G., Saletta, Federica, Franshaw, Laura, Liu, Jie, Gifford, Andrew, Weber, Martin A., Rodriguez, Michael, Cohn, Richard J., Arndt, Greg, Tyrrell, Vanessa, Haber, Michelle, Trahair, Toby, Marshall, Glenn M., McDonald, Kerrie, Cowley, Mark J., Ziegler, David S.
Pubblicato in Cancer Biol Ther (2018)

Targeting the LOX/hypoxia axis reverses many of the features that make pancreatic cancer deadly: inhibition of LOX abrogates metastasis and enhances drug efficacy

di Miller, Bryan W, Morton, Jennifer P, Pinese, Mark, Saturno, Grazia, Jamieson, Nigel B, McGhee, Ewan, Timpson, Paul, Leach, Joshua, McGarry, Lynn, Shanks, Emma, Bailey, Peter, Chang, David, Oien, Karin, Karim, Saadia, Au, Amy, Steele, Colin, Carter, Christopher Ross, McKay, Colin, Anderson, Kurt, Evans, Thomas R Jeffry, Marais, Richard, Springer, Caroline, Biankin, Andrew, Erler, Janine T, Sansom, Owen J
Pubblicato in EMBO Mol Med (2015)

Genomic stratification and liquid biopsy in a rare adrenocortical carcinoma (ACC) case, with dual lung metastases

di McCabe, Mark J., Pinese, Mark, Chan, Chia-Ling, Sheriff, Nisa, Thompson, Tanya J., Grady, John, Wong, Marie, Gauthier, Marie-Emilie A., Puttick, Clare, Gayevskiy, Velimir, Hajdu, Elektra, Wong, Stephen Q., Barrett, Wade, Earls, Peter, Lukeis, Robyn, Cheng, Yuen Y., Lin, Ruby C.Y., Thomas, David M., Watkins, D. Neil, Dinger, Marcel E., McCormack, Ann I., Cowley, Mark J.
Pubblicato in Cold Spring Harb Mol Case Stud (2019)