SIGI: score-based identification of genomic islands

Por Merkl, Rainer
Publicado em 2004

Modelling the evolution of the archeal tryptophan synthase

Por Merkl, Rainer
Publicado em 2007

H2r: Identification of evolutionary important residues by means of an entropy based analysis of multiple sequence alignments

Por Merkl, Rainer, Zwick, Matthias
Publicado em 2008

GO4genome: A Prokaryotic Phylogeny Based on Genome Organization

Por Merkl, Rainer, Wiezer, Arnim
Publicado em 2009

Genes optimized by evolution for accurate and fast translation encode in Archaea and Bacteria a broad and characteristic spectrum of protein functions

Por von Mandach, Conrad, Merkl, Rainer
Publicado em 2010

Maize EMBRYO SAC family peptides interact differentially with pollen tubes and fungal cells

Por Woriedh, Mayada, Merkl, Rainer, Dresselhaus, Thomas
Publicado no J Exp Bot (2015)

Oligo kernels for datamining on biological sequences: a case study on prokaryotic translation initiation sites

Por Meinicke, Peter, Tech, Maike, Morgenstern, Burkhard, Merkl, Rainer
Publicado em 2004

An assessment of catalytic residue 3D ensembles for the prediction of enzyme function

Por Žváček, Clemens, Friedrichs, Gerald, Heizinger, Leonhard, Merkl, Rainer
Publicado no BMC Bioinformatics (2015)

Long-Term Persistence of Bi-functionality Contributes to the Robustness of Microbial Life through Exaptation

Por Plach, Maximilian G., Reisinger, Bernd, Sterner, Reinhard, Merkl, Rainer
Publicado no PLoS Genet (2016)

Assessing in silico the recruitment and functional spectrum of bacterial enzymes from secondary metabolism

Por Veprinskiy, Valery, Heizinger, Leonhard, Plach, Maximilian G., Merkl, Rainer
Publicado no BMC Evol Biol (2017)

Generation of catalytic human Ago4 identifies structural elements important for RNA cleavage

Por Hauptmann, Judith, Kater, Lukas, Löffler, Patrick, Merkl, Rainer, Meister, Gunter
Publicado em 2014

CLIPS-1D: analysis of multiple sequence alignments to deduce for residue-positions a role in catalysis, ligand-binding, or protein structure

Por Janda Jan-Oliver, Busch Markus, Kück Fabian, Porfenenko Mikhail, Merkl Rainer
Publicado em 2012-04-01

CLIPS-1D: analysis of multiple sequence alignments to deduce for residue-positions a role in catalysis, ligand-binding, or protein structure

Por Janda, Jan-Oliver, Busch, Markus, Kück, Fabian, Porfenenko, Mikhail, Merkl, Rainer
Publicado em 2012

TransCent: Computational enzyme design by transferring active sites and considering constraints relevant for catalysis

Por Fischer, André, Enkler, Nils, Neudert, Gerd, Bocola, Marco, Sterner, Reinhard, Merkl, Rainer
Publicado em 2009

Post-translational glycosylation of the contact site A protein of Dictyostelium discoideum is important for stability but not for its function in cell adhesion

Por Hohmann, Hans-Peter, Bozzaro, Salvatore, Merkl, Rainer, Wallraff, Eva, Yoshida, Motonobu, Weinhart, Ulrike, Gerisch, Günther
Publicado em 1987

DNA sequence encoded repression of rRNA gene transcription in chromatin

Por Felle, Max, Exler, Josef H., Merkl, Rainer, Dachauer, Karoline, Brehm, Alexander, Grummt, Ingrid, Längst, Gernot
Publicado em 2010

The extended AT-hook is a novel RNA binding motif

Por Filarsky, Michael, Zillner, Karina, Araya, Ingrid, Villar-Garea, Ana, Merkl, Rainer, Längst, Gernot, Németh, Attila
Publicado no RNA Biol (2015)

H2rs: Deducing evolutionary and functionally important residue positions by means of an entropy and similarity based analysis of multiple sequence alignments

Por Janda, Jan-Oliver, Popal, Ajmal, Bauer, Jochen, Busch, Markus, Klocke, Michael, Spitzer, Wolfgang, Keller, Jörg, Merkl, Rainer
Publicado em 2014

Plasmodium falciparum Nucleosomes Exhibit Reduced Stability and Lost Sequence Dependent Nucleosome Positioning

Por Silberhorn, Elisabeth, Schwartz, Uwe, Löffler, Patrick, Schmitz, Samuel, Symelka, Anne, de Koning-Ward, Tania, Merkl, Rainer, Längst, Gernot
Publicado no PLoS Pathog (2016)

Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models

Por Waack, Stephan, Keller, Oliver, Asper, Roman, Brodag, Thomas, Damm, Carsten, Fricke, Wolfgang Florian, Surovcik, Katharina, Meinicke, Peter, Merkl, Rainer
Publicado em 2006