How to visually interpret biological data using networks

Autor Merico, Daniele, Gfeller, David, Bader, Gary D
Vydáno 2009

WordCloud: a Cytoscape plugin to create a visual semantic summary of networks

Autor Oesper, Layla, Merico, Daniele, Isserlin, Ruth, Bader, Gary D
Vydáno 2011

Genetic Analysis Workshop 18 single-nucleotide variant prioritization based on protein impact, sequence conservation, and gene annotation

Autor Nalpathamkalam, Thomas, Derkach, Andriy, Paterson, Andrew D, Merico, Daniele
Vydáno 2014

Enrichment Map – a Cytoscape app to visualize and explore OMICs pathway enrichment results

Autor Isserlin, Ruth, Merico, Daniele, Voisin, Veronique, Bader, Gary D.
Vydáno 2014

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

Autor Merico, Daniele, Isserlin, Ruth, Stueker, Oliver, Emili, Andrew, Bader, Gary D.
Vydáno 2010

Evaluation of gene-based association tests for analyzing rare variants using Genetic Analysis Workshop 18 data

Autor Derkach, Andriy, Lawless , Jerry F, Merico, Daniele, Paterson, Andrew D, Sun, Lei
Vydáno 2014

MicroRNA Expression during Bovine Oocyte Maturation and Fertilization

Autor Gilchrist, Graham C., Tscherner, Allison, Nalpathamkalam, Thomas, Merico, Daniele, LaMarre, Jonathan
Vydáno v Int J Mol Sci (2016)

Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers

Autor Boscarino, Cathy, Nalpathamkalam, Thomas, Pellecchia, Giovanna, Li, Weili, Thiruvahindrapuram, Bhooma, Merico, Daniele
Vydáno v G3 (Bethesda) (2019)

A balance between NF-Y and p53 governs the pro- and anti-apoptotic transcriptional response

Autor Benatti, Paolo, Basile, Valentina, Merico, Daniele, Fantoni, Luca Isaia, Tagliafico, Enrico, Imbriano, Carol
Vydáno 2008

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps

Autor Isserlin, Ruth, Merico, Daniele, Alikhani-Koupaei, Rasoul, Gramolini, Anthony, Bader, Gary D, Emili, Andrew
Vydáno 2010

The Histone-Like NF-Y Is a Bifunctional Transcription Factor

Autor Ceribelli, Michele, Dolfini, Diletta, Merico, Daniele, Gatta, Raffaella, Viganò, Alessandra M., Pavesi, Giulio, Mantovani, Roberto
Vydáno 2008

Protein Kinase C Epsilon and Genetic Networks in Osteosarcoma Metastasis

Autor Goudarzi, Atta, Gokgoz, Nalan, Gill, Mona, Pinnaduwage, Dushanthi, Merico, Daniele, Wunder, Jay S., Andrulis, Irene L.
Vydáno 2013

Performance of case-control rare copy number variation annotation in classification of autism

Autor Engchuan, Worrawat, Dhindsa, Kiret, Lionel, Anath C, Scherer, Stephen W, Chan, Jonathan H, Merico, Daniele
Vydáno v BMC Med Genomics (2015)

Systems analysis reveals down-regulation of a network of pro-survival miRNAs drives the apoptotic response in dilated cardiomyopathy

Autor Isserlin, Ruth, Merico, Daniele, Wang, Dingyan, Vuckovic, Dajana, Bousette, Nicolas, Gramolini, Anthony O., Bader, Gary D., Emili, Andrew
Vydáno v Mol Biosyst (2014)

Transcriptional Network of p63 in Human Keratinocytes

Autor Pozzi, Silvia, Zambelli, Federico, Merico, Daniele, Pavesi, Giulio, Robert, Amélie, Maltère, Peggy, Gidrol, Xavier, Mantovani, Roberto, Vigano, M. Alessandra
Vydáno 2009

MicroRNA Dysregulation, Gene Networks, and Risk for Schizophrenia in 22q11.2 Deletion Syndrome

Autor Merico, Daniele, Costain, Gregory, Butcher, Nancy J., Warnica, William, Ogura, Lucas, Alfred, Simon E., Brzustowicz, Linda M., Bassett, Anne S.
Vydáno v Front Neurol (2014)

Copy Number Variable MicroRNAs in Schizophrenia and Their Neurodevelopmental Gene Targets

Autor Warnica, William, Merico, Daniele, Costain, Gregory, Alfred, Simon E., Wei, John, Marshall, Christian R., Scherer, Stephen W., Bassett, Anne S.
Vydáno v Biol Psychiatry (2014)

A homozygous mutation in the stem II domain of RNU4ATAC causes typical Roifman syndrome

Autor Dinur Schejter, Yael, Ovadia, Adi, Alexandrova, Roumiana, Thiruvahindrapuram, Bhooma, Pereira, Sergio L., Manson, David E., Vincent, Ajoy, Merico, Daniele, Roifman, Chaim M.
Vydáno v NPJ Genom Med (2017)

New p63 targets in keratinocytes identified by a genome-wide approach

Autor Viganò, M Alessandra, Lamartine, Jérôme, Testoni, Barbara, Merico, Daniele, Alotto, Daniela, Castagnoli, Carlotta, Robert, Amèlie, Candi, Eleonora, Melino, Gerry, Gidrol, Xavier, Mantovani, Roberto
Vydáno 2006

Whole-genome sequencing suggests mechanisms for 22q11.2 deletion-associated Parkinson’s disease

Autor Butcher, Nancy J., Merico, Daniele, Zarrei, Mehdi, Ogura, Lucas, Marshall, Christian R., Chow, Eva W. C., Lang, Anthony E., Scherer, Stephen W., Bassett, Anne S.
Vydáno v PLoS One (2017)