Minimum Information about a Genotyping Experiment (MIGEN)

par Huang, Jie, Mirel, Daniel, Pugh, Elizabeth, Xing, Chao, Robinson, Peter N., Pertsemlidis, Alexander, Ding, LiangHao, Kozlitina, Julia, Maher, Joseph, Rios, Jonathan, Story, Michael, Marthandan, Nishanth, Scheuermann, Richard H.
Publié 2011

iReceptor: a platform for querying and analyzing antibody/B-cell and T-cell receptor repertoire data across federated repositories

par Corrie, Brian D., Marthandan, Nishanth, Zimonja, Bojan, Jaglale, Jerome, Zhou, Yang, Barr, Emily, Knoetze, Nicole, Breden, Frances M. W., Christley, Scott, Scott, Jamie K., Cowell, Lindsay G., Breden, Felix
Publié dans Immunol Rev (2018)

AIRR Community Standardized Representations for Annotated Immune Repertoires

par Vander Heiden, Jason Anthony, Marquez, Susanna, Marthandan, Nishanth, Bukhari, Syed Ahmad Chan, Busse, Christian E., Corrie, Brian, Hershberg, Uri, Kleinstein, Steven H., Matsen IV, Frederick A., Ralph, Duncan K., Rosenfeld, Aaron M., Schramm, Chaim A., Christley, Scott, Laserson, Uri
Publié dans Front Immunol (2018)

SEQUENCE FEATURE VARIANT TYPE (SFVT) ANALYSIS OF THE HLA GENETIC ASSOCIATION IN JUVENILE IDIOPATHIC ARTHRITIS

par THOMSON, GLENYS, MARTHANDAN, NISHANTH, HOLLENBACH, JILL A., MACK, STEVEN J., ERLICH, HENRY A., SINGLE, RICHARD M., WALLER, MATTHEW J., MARSH, STEVEN G. E., GUIDRY, PAULA A., KARP, DAVID R., SCHEUERMANN, RICHARD H., THOMPSON, SUSAN D., GLASS, DAVID N., HELMBERG, WOLFGANG
Publié 2010

Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data

par Rubelt, Florian, Busse, Christian E, Bukhari, Syed Ahmad Chan, Bürckert, Jean-Philippe, Mariotti-Ferrandiz, Encarnita, Cowell, Lindsay G, Watson, Corey T, Marthandan, Nishanth, Faison, William J, Hershberg, Uri, Laserson, Uri, Corrie, Brian D, Davis, Mark M, Peters, Bjoern, Lefranc, Marie-Paule, Scott, Jamie K, Breden, Felix, Prak, Eline T Luning, Kleinstein, Steven H
Publié dans Nat Immunol (2017)

VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements

par Toby, Inimary T., Levin, Mikhail K., Salinas, Edward A., Christley, Scott, Bhattacharya, Sanchita, Breden, Felix, Buntzman, Adam, Corrie, Brian, Fonner, John, Gupta, Namita T., Hershberg, Uri, Marthandan, Nishanth, Rosenfeld, Aaron, Rounds, William, Rubelt, Florian, Scarborough, Walter, Scott, Jamie K., Uduman, Mohamed, Vander Heiden, Jason A., Scheuermann, Richard H., Monson, Nancy, Kleinstein, Steven H., Cowell, Lindsay G.
Publié dans BMC Bioinformatics (2016)

Novel sequence feature variant type analysis of the HLA genetic association in systemic sclerosis

par Karp, David R., Marthandan, Nishanth, Marsh, Steven G.E., Ahn, Chul, Arnett, Frank C., DeLuca, David S., Diehl, Alexander D., Dunivin, Raymond, Eilbeck, Karen, Feolo, Michael, Guidry, Paula A., Helmberg, Wolfgang, Lewis, Suzanna, Mayes, Maureen D., Mungall, Chris, Natale, Darren A., Peters, Bjoern, Petersdorf, Effie, Reveille, John D., Smith, Barry, Thomson, Glenys, Waller, Matthew J., Scheuermann, Richard H.
Publié 2010

Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming

par Ohlin, Mats, Scheepers, Cathrine, Corcoran, Martin, Lees, William D., Busse, Christian E., Bagnara, Davide, Thörnqvist, Linnea, Bürckert, Jean-Philippe, Jackson, Katherine J. L., Ralph, Duncan, Schramm, Chaim A., Marthandan, Nishanth, Breden, Felix, Scott, Jamie, Matsen IV, Frederick A., Greiff, Victor, Yaari, Gur, Kleinstein, Steven H., Christley, Scott, Sherkow, Jacob S., Kossida, Sofia, Lefranc, Marie-Paule, van Zelm, Menno C., Watson, Corey T., Collins, Andrew M.
Publié dans Front Immunol (2019)

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

par Taylor, Chris F, Field, Dawn, Sansone, Susanna-Assunta, Aerts, Jan, Apweiler, Rolf, Ashburner, Michael, Ball, Catherine A, Binz, Pierre-Alain, Bogue, Molly, Booth, Tim, Brazma, Alvis, Brinkman, Ryan R, Clark, Adam Michael, Deutsch, Eric W, Fiehn, Oliver, Fostel, Jennifer, Ghazal, Peter, Gibson, Frank, Gray, Tanya, Grimes, Graeme, Hancock, John M, Hardy, Nigel W, Hermjakob, Henning, Julian, Randall K, Kane, Matthew, Kettner, Carsten, Kinsinger, Christopher, Kolker, Eugene, Kuiper, Martin, Le Novère, Nicolas, Leebens-Mack, Jim, Lewis, Suzanna E, Lord, Phillip, Mallon, Ann-Marie, Marthandan, Nishanth, Masuya, Hiroshi, McNally, Ruth, Mehrle, Alexander, Morrison, Norman, Orchard, Sandra, Quackenbush, John, Reecy, James M, Robertson, Donald G, Rocca-Serra, Philippe, Rodriguez, Henry, Rosenfelder, Heiko, Santoyo-Lopez, Javier, Scheuermann, Richard H, Schober, Daniel, Smith, Barry, Snape, Jason, Stoeckert, Christian J, Tipton, Keith, Sterk, Peter, Untergasser, Andreas, Vandesompele, Jo, Wiemann, Stefan
Publié 2008