Structuprint: a scalable and extensible tool for two-dimensional representation of protein surfaces

par Kontopoulos, Dimitrios Georgios, Vlachakis, Dimitrios, Tsiliki, Georgia, Kossida, Sofia
Publié dans BMC Struct Biol (2016)

Erratum to: Structuprint: a scalable and extensible tool for two-dimensional representation of protein surfaces

par Kontopoulos, Dimitrios Georgios, Vlachakis, Dimitrios, Tsiliki, Georgia, Kossida, Sofia
Publié dans BMC Struct Biol (2016)

IG and TR single chain fragment variable (scFv) sequence analysis: a new advanced functionality of IMGT/V-QUEST and IMGT/HighV-QUEST

par Giudicelli, Véronique, Duroux, Patrice, Kossida, Sofia, Lefranc, Marie-Paule
Publié dans BMC Immunol (2017)

Lipid Droplets Are a Physiological Nucleoporin Reservoir

par Kumanski, Sylvain, Viart, Benjamin T., Kossida, Sofia, Moriel-Carretero, María
Publié dans Cells (2021)

IMGT/HighV-QUEST Statistical Significance of IMGT Clonotype (AA) Diversity per Gene for Standardized Comparisons of Next Generation Sequencing Immunoprofiles of Immunoglobulins and...

par Aouinti, Safa, Malouche, Dhafer, Giudicelli, Véronique, Kossida, Sofia, Lefranc, Marie-Paule
Publié dans PLoS One (2015)

Correction: IMGT/HighV-QUEST Statistical Significance of IMGT Clonotype (AA) Diversity per Gene for Standardized Comparisons of Next Generation Sequencing Immunoprofiles of Immunog...

par Aouinti, Safa, Malouche, Dhafer, Giudicelli, Véronique, Kossida, Sofia, Lefranc, Marie-Paule
Publié dans PLoS One (2016)

An updated evolutionary study of the Notch family reveals a new ancient origin and novel invariable motifs as potential pharmacological targets

par Vlachakis, Dimitrios, Papageorgiou, Louis, Papadaki, Ariadne, Georga, Maria, Kossida, Sofia, Eliopoulos, Elias
Publié dans PeerJ (2020)

IMGT/StatClonotype for Pairwise Evaluation and Visualization of NGS IG and TR IMGT Clonotype (AA) Diversity or Expression from IMGT/HighV-QUEST

par Aouinti, Safa, Giudicelli, Véronique, Duroux, Patrice, Malouche, Dhafer, Kossida, Sofia, Lefranc, Marie-Paule
Publié dans Front Immunol (2016)

Speeding up the drug discovery process: structural similarity searches using molecular surfaces

par Vlachakis, Dimitrios, Tsiliki, Georgia, Tsagkrasoulis, Dimosthenis, Carvalho, Carla Sofia, Megalooikonomou, Vasileios, Kossida, Sofia
Publié dans EMBnet J (2012)

Recruitment of ubiquitin-activating enzyme UBA1 to DNA by poly(ADP-ribose) promotes ATR signalling

par Kumbhar, Ramhari, Vidal-Eychenié, Sophie, Kontopoulos, Dimitrios-Georgios, Larroque, Marion, Larroque, Christian, Basbous, Jihane, Kossida, Sofia, Ribeyre, Cyril, Constantinou, Angelos
Publié dans Life Sci Alliance (2018)

IMGT(®) Biocuration and Comparative Analysis of Bos taurus and Ovis aries TRA/TRD Loci

par Pégorier, Perrine, Bertignac, Morgane, Nguefack Ngoune, Viviane, Folch, Géraldine, Jabado-Michaloud, Joumana, Giudicelli, Véronique, Duroux, Patrice, Lefranc, Marie-Paule, Kossida, Sofia
Publié dans Genes (Basel) (2020)

The T Cell Receptor (TRB) Locus in Tursiops truncatus: From Sequence to Structure of the Alpha/Beta Heterodimer in the Human/Dolphin Comparison

par Linguiti, Giovanna, Kossida, Sofia, Pierri, Ciro Leonardo, Jabado-Michaloud, Joumana, Folch, Geraldine, Massari, Serafina, Lefranc, Marie-Paule, Ciccarese, Salvatrice, Antonacci, Rachele
Publié dans Genes (Basel) (2021)

IMGT® Biocuration and Comparative Study of the T Cell Receptor Beta Locus of Veterinary Species Based on Homo sapiens TRB

par Pégorier, Perrine, Bertignac, Morgane, Chentli, Imène, Nguefack Ngoune, Viviane, Folch, Géraldine, Jabado-Michaloud, Joumana, Hadi-Saljoqi, Saida, Giudicelli, Véronique, Duroux, Patrice, Lefranc, Marie-Paule, Kossida, Sofia
Publié dans Front Immunol (2020)

IMGT(®), the international ImMunoGeneTics information system(®) 25 years on

par Lefranc, Marie-Paule, Giudicelli, Véronique, Duroux, Patrice, Jabado-Michaloud, Joumana, Folch, Géraldine, Aouinti, Safa, Carillon, Emilie, Duvergey, Hugo, Houles, Amélie, Paysan-Lafosse, Typhaine, Hadi-Saljoqi, Saida, Sasorith, Souphatta, Lefranc, Gérard, Kossida, Sofia
Publié dans Nucleic Acids Res (2014)

Coupling of Single Molecule, Long Read Sequencing with IMGT/HighV-QUEST Analysis Expedites Identification of SIV gp140-Specific Antibodies from scFv Phage Display Libraries

par Han, Seung Yub, Antoine, Alesia, Howard, David, Chang, Bryant, Chang, Woo Sung, Slein, Matthew, Deikus, Gintaras, Kossida, Sofia, Duroux, Patrice, Lefranc, Marie-Paule, Sebra, Robert P., Smith, Melissa L., Fofana, Ismael Ben F.
Publié dans Front Immunol (2018)

Pacific Biosciences Sequencing and IMGT/HighV-QUEST Analysis of Full-Length Single Chain Fragment Variable from an In Vivo Selected Phage-Display Combinatorial Library

par Hemadou, Audrey, Giudicelli, Véronique, Smith, Melissa Laird, Lefranc, Marie-Paule, Duroux, Patrice, Kossida, Sofia, Heiner, Cheryl, Hepler, N. Lance, Kuijpers, John, Groppi, Alexis, Korlach, Jonas, Mondon, Philippe, Ottones, Florence, Jacobin-Valat, Marie-Josée, Laroche-Traineau, Jeanny, Clofent-Sanchez, Gisèle
Publié dans Front Immunol (2017)

Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming

par Ohlin, Mats, Scheepers, Cathrine, Corcoran, Martin, Lees, William D., Busse, Christian E., Bagnara, Davide, Thörnqvist, Linnea, Bürckert, Jean-Philippe, Jackson, Katherine J. L., Ralph, Duncan, Schramm, Chaim A., Marthandan, Nishanth, Breden, Felix, Scott, Jamie, Matsen IV, Frederick A., Greiff, Victor, Yaari, Gur, Kleinstein, Steven H., Christley, Scott, Sherkow, Jacob S., Kossida, Sofia, Lefranc, Marie-Paule, van Zelm, Menno C., Watson, Corey T., Collins, Andrew M.
Publié dans Front Immunol (2019)

Higher-order connections between stereotyped subsets: implications for improved patient classification in CLL

par Agathangelidis, Andreas, Chatzidimitriou, Anastasia, Gemenetzi, Katerina, Giudicelli, Veronique, Karypidou, Maria, Plevova, Karla, Davis, Zadie, Yan, Xiao-Jie, Jeromin, Sabine, Schneider, Christof, Pedersen, Lone Bredo, Tschumper, Renee C., Sutton, Lesley-Ann, Baliakas, Panagiotis, Scarfò, Lydia, van Gastel, Ellen J., Armand, Marine, Tausch, Eugen, Biderman, Bella, Baer, Constance, Bagnara, Davide, Navarro, Alba, Langlois de Septenville, Anne, Guido, Valentina, Mitterbauer-Hohendanner, Gerlinde, Dimovski, Aleksandar, Brieghel, Christian, Lawless, Sarah, Meggendorfer, Manja, Brazdilova, Kamila, Ritgen, Matthias, Facco, Monica, Tresoldi, Cristina, Visentin, Andrea, Patriarca, Andrea, Catherwood, Mark, Bonello, Lisa, Sudarikov, Andrey, Vanura, Katrina, Roumelioti, Maria, Skuhrova Francova, Hana, Moysiadis, Theodoros, Veronese, Silvio, Giannopoulos, Krzysztof, Mansouri, Larry, Karan-Djurasevic, Teodora, Sandaltzopoulos, Raphael, Bödör, Csaba, Fais, Franco, Kater, Arnon, Panovska, Irina, Rossi, Davide, Alshemmari, Salem, Panagiotidis, Panagiotis, Costeas, Paul, Espinet, Blanca, Antic, Darko, Foroni, Letizia, Montillo, Marco, Trentin, Livio, Stavroyianni, Niki, Gaidano, Gianluca, Francia di Celle, Paola, Niemann, Carsten, Campo, Elias, Anagnostopoulos, Achilles, Pott, Christiane, Fischer, Kirsten, Hallek, Michael, Oscier, David, Stilgenbauer, Stephan, Haferlach, Claudia, Jelinek, Diane, Chiorazzi, Nicholas, Pospisilova, Sarka, Lefranc, Marie-Paule, Kossida, Sofia, Langerak, Anton W., Belessi, Chrysoula, Davi, Frederic, Rosenquist, Richard, Ghia, Paolo, Stamatopoulos, Kostas
Publié dans Blood (2021)