SMuRF: a novel tool to identify regulatory elements enriched for somatic point mutations

由 Guilhamon, Paul, Lupien, Mathieu
發表在 BMC Bioinformatics (2018)

Laying a solid foundation for Manhattan ‘Setting the functional basis for the post-GWAS era’

由 Zhang, Xiaoyang, Bailey, Swneke D., Lupien, Mathieu
出版 2014

Emergence of the noncoding cancer genome: a target of genetic and epigenetic alterations

由 Zhou, Stanley, Treloar, Aislinn E., Lupien, Mathieu
發表在 Cancer Discov (2016)

Enhancer alterations in cancer: a source for a cell identity crisis

由 Kron, Ken J, Bailey, Swneke D, Lupien, Mathieu
發表在 Genome Med (2014)

PBX1 Genomic Pioneer Function Drives ERα Signaling Underlying Progression in Breast Cancer

由 Magnani, Luca, Ballantyne, Elizabeth B., Zhang, Xiaoyang, Lupien, Mathieu
出版 2011

Large organized chromatin lysine domains help distinguish primitive from differentiated cell populations

由 Madani Tonekaboni, Seyed Ali, Haibe-Kains, Benjamin, Lupien, Mathieu
發表在 Nat Commun (2021)

Cancer heterogeneity: origins and implications for genetic association studies

由 Urbach, Davnah, Lupien, Mathieu, Karagas, Margaret R., Moore, Jason H.
出版 2012

ABC: a tool to identify SNVs causing allele-specific transcription factor binding from ChIP-Seq experiments

由 Bailey, Swneke D., Virtanen, Carl, Haibe-Kains, Benjamin, Lupien, Mathieu
發表在 Bioinformatics (2015)

Genomic Collaboration of Estrogen Receptor α and Extracellular Signal-Regulated Kinase 2 in Regulating Gene and Proliferation Programs

由 Madak-Erdogan, Zeynep, Lupien, Mathieu, Stossi, Fabio, Brown, Myles, Katzenellenbogen, Benita S.
出版 2011

Pioneer of prostate cancer: past, present and the future of FOXA1

由 Teng, Mona, Zhou, Stanley, Cai, Changmeng, Lupien, Mathieu, He, Housheng Hansen
發表在 Protein Cell (2020)

Overexpression of Activated Murine Notch1 and Notch3 in Transgenic Mice Blocks Mammary Gland Development and Induces Mammary Tumors

由 Hu, Chunyan, Diévart, Anne, Lupien, Mathieu, Calvo, Ezequiel, Tremblay, Gilles, Jolicoeur, Paul
出版 2006

Exploiting tumor epigenetics to improve oncolytic virotherapy

由 Forbes, Nicole E., Abdelbary, Hesham, Lupien, Mathieu, Bell, John C., Diallo, Jean-Simon
出版 2013

A global assessment of cancer genomic alterations in epigenetic mechanisms

由 Shah, Muhammad A, Denton, Emily L, Arrowsmith, Cheryl H, Lupien, Mathieu, Schapira, Matthieu
發表在 Epigenetics Chromatin (2014)

Organizing combinatorial transcription factor recruitment at cis-regulatory modules

由 Dubois-Chevalier, Julie, Mazrooei, Parisa, Lupien, Mathieu, Staels, Bart, Lefebvre, Philippe, Eeckhoute, Jérôme
發表在 Transcription (2017)

Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks

由 Madani Tonekaboni, Seyed Ali, Mazrooei, Parisa, Kofia, Victor, Haibe-Kains, Benjamin, Lupien, Mathieu
發表在 Genome Res (2019)

Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus

由 Zhang, Xiaoyang, Cowper-Sal·lari, Richard, Bailey, Swneke D., Moore, Jason H., Lupien, Mathieu
出版 2012

The histone variant H2A.Z is an important regulator of enhancer activity

由 Brunelle, Mylène, Nordell Markovits, Alexei, Rodrigue, Sébastien, Lupien, Mathieu, Jacques, Pierre-Étienne, Gévry, Nicolas
發表在 Nucleic Acids Res (2015)

Unique ERα Cistromes Control Cell Type-Specific Gene Regulation

由 Krum, Susan A., Miranda-Carboni, Gustavo A., Lupien, Mathieu, Eeckhoute, Jerome, Carroll, Jason S., Brown, Myles
出版 2008

Layers of epistasis: genome-wide regulatory networks and network approaches to genome-wide association studies

由 Cowper-Sal·lari, Richard, Cole, Michael D., Karagas, Margaret R., Lupien, Mathieu, Moore, Jason H.
出版 2010

Variant Set Enrichment: an R package to identify disease-associated functional genomic regions

由 Ahmed, Musaddeque, Sallari, Richard C., Guo, Haiyang, Moore, Jason H., He, Housheng Hansen, Lupien, Mathieu
發表在 BioData Min (2017)