The rules and impact of nonsense-mediated mRNA decay in human cancers

di Lindeboom, Rik G.H., Supek, Fran, Lehner, Ben
Pubblicato in Nat Genet (2016)

The impact of nonsense-mediated mRNA decay on genetic disease, gene editing and cancer immunotherapy

di Lindeboom, Rik G.H., Vermeulen, Michiel, Lehner, Ben, Supek, Fran
Pubblicato in Nat Genet (2019)

Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs

di Smits, Arne H., Lindeboom, Rik G.H., Perino, Matteo, van Heeringen, Simon J., Veenstra, Gert Jan C., Vermeulen, Michiel
Pubblicazione 2014

Proteomic landscape of the primary somatosensory cortex upon sensory deprivation

di Kole, Koen, Lindeboom, Rik G.H., Baltissen, Marijke P.A., Jansen, Pascal W.T.C., Vermeulen, Michiel, Tiesinga, Paul, Celikel, Tansu
Pubblicato in Gigascience (2017)

Erratum to: Proteomic landscape of the primary somatosensory cortex upon sensory deprivation

di Kole, Koen, Lindeboom, Rik G H, Baltissen, Marijke P A, Jansen, Pascal W T C, Vermeulen, Michiel, Tiesinga, Paul, Celikel, Tansu
Pubblicato in Gigascience (2018)

Single-Molecule Imaging Uncovers Rules Governing Nonsense-Mediated mRNA Decay

di Hoek, Tim A., Khuperkar, Deepak, Lindeboom, Rik G.H., Sonneveld, Stijn, Verhagen, Bram M.P., Boersma, Sanne, Vermeulen, Michiel, Tanenbaum, Marvin E.
Pubblicato in Mol Cell (2019)

NuRD-interacting protein ZFP296 regulates genome-wide NuRD localization and differentiation of mouse embryonic stem cells

di Kloet, Susan L., Karemaker, Ino D., van Voorthuijsen, Lisa, Lindeboom, Rik G. H., Baltissen, Marijke P., Edupuganti, Raghu R., Poramba-Liyanage, Deepani W., Jansen, Pascal W. T. C., Vermeulen, Michiel
Pubblicato in Nat Commun (2018)

Integrative multi‐omics analysis of intestinal organoid differentiation

di Lindeboom, Rik GH, van Voorthuijsen, Lisa, Oost, Koen C, Rodríguez‐Colman, Maria J, Luna‐Velez, Maria V, Furlan, Cristina, Baraille, Floriane, Jansen, Pascal WTC, Ribeiro, Agnès, Burgering, Boudewijn MT, Snippert, Hugo J, Vermeulen, Michiel
Pubblicato in Mol Syst Biol (2018)

N(6)-methyladenosine (m(6)A) recruits and repels proteins to regulate mRNA homeostasis

di Edupuganti, Raghu R, Geiger, Simon, Lindeboom, Rik G H, Shi, Hailing, Hsu, Phillip J, Lu, Zhike, Wang, Shuang-Yin, Baltissen, Marijke P A, Jansen, Pascal W T C, Rossa, Martin, Müller, Markus, Stunnenberg, Hendrik G, He, Chuan, Carell, Thomas, Vermeulen, Michiel
Pubblicato in Nat Struct Mol Biol (2017)

Specific Labeling of Stem Cell Activity in Human Colorectal Organoids Using an ASCL2-Responsive Minigene

di Oost, Koen C., van Voorthuijsen, Lisa, Fumagalli, Arianna, Lindeboom, Rik G.H., Sprangers, Joep, Omerzu, Manja, Rodriguez-Colman, Maria J., Heinz, Maria C., Verlaan-Klink, Ingrid, Maurice, Madelon M., Burgering, Boudewijn M.T., van Rheenen, Jacco, Vermeulen, Michiel, Snippert, Hugo J.G.
Pubblicato in Cell Rep (2018)

RNF43 truncations trap CK1 to drive niche‐independent self‐renewal in cancer

di Spit, Maureen, Fenderico, Nicola, Jordens, Ingrid, Radaszkiewicz, Tomasz, Lindeboom, Rik GH, Bugter, Jeroen M, Cristobal, Alba, Ootes, Lars, van Osch, Max, Janssen, Eline, Boonekamp, Kim E, Hanakova, Katerina, Potesil, David, Zdrahal, Zbynek, Boj, Sylvia F, Medema, Jan Paul, Bryja, Vitezslav, Koo, Bon‐Kyoung, Vermeulen, Michiel, Maurice, Madelon M
Pubblicato in EMBO J (2020)

Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131

di Varier, Radhika A., de Santa Pau, Enrique Carrillo, van der Groep, Petra, Lindeboom, Rik G. H., Matarese, Filomena, Mensinga, Anneloes, Smits, Arne H., Edupuganti, Raghu Ram, Baltissen, Marijke P., Jansen, Pascal W. T. C., ter Hoeve, Natalie, van Weely, Danny R., Poser, Ina, van Diest, Paul J., Stunnenberg, Hendrik G., Vermeulen, Michiel
Pubblicato in J Biol Chem (2016)

Hydroxychloroquine Inhibits the Trained Innate Immune Response to Interferons

di Rother, Nils, Yanginlar, Cansu, Lindeboom, Rik G.H., Bekkering, Siroon, van Leent, Mandy M.T., Buijsers, Baranca, Jonkman, Inge, de Graaf, Mark, Baltissen, Marijke, Lamers, Lieke A., Riksen, Niels P., Fayad, Zahi A., Mulder, Willem J.M., Hilbrands, Luuk B., Joosten, Leo A.B., Netea, Mihai G., Vermeulen, Michiel, van der Vlag, Johan, Duivenvoorden, Raphaël
Pubblicato in Cell Rep Med (2020)

Multi-omics profiling reveals a distinctive epigenome signature for high-risk acute promyelocytic leukemia

di Singh, Abhishek A., Petraglia, Francesca, Nebbioso, Angela, Yi, Guoqiang, Conte, Mariarosaria, Valente, Sergio, Mandoli, Amit, Scisciola, Lucia, Lindeboom, Rik, Kerstens, Hinri, Janssen-Megens, Eva M., Pourfarzad, Farzin, Habibi, Ehsan, Berentsen, Kim, Kim, Bowon, Logie, Colin, Heath, Simon, Wierenga, Albertus T.J., Clarke, Laura, Flicek, Paul, Jansen, Joop H., Kuijpers, Taco, Yaspo, Marie Laure, Valle, Veronique Della, Bernard, Olivier, Gut, Ivo, Vellenga, Edo, Stunnenberg, Hendrik G., Mai, Antonello, Altucci, Lucia, Martens, Joost H.A.
Pubblicato in Oncotarget (2018)

Early human lung immune cell development and its role in epithelial cell fate

di Barnes, Josephine L., Yoshida, Masahiro, He, Peng, Worlock, Kaylee B., Lindeboom, Rik G.H., Suo, Chenqu, Pett, J. Patrick, Wilbrey-Clark, Anna, Dann, Emma, Mamanova, Lira, Richardson, Laura, Polanski, Krzysztof, Pennycuick, Adam, Allen-Hyttinen, Jessica, Herczeg, Iván T., Arzili, Romina, Hynds, Robert E., Teixeira, Vitor H., Haniffa, Muzlifah, Lim, Kyungtae, Sun, Dawei, Rawlins, Emma L., Oliver, Amanda J., Lyons, Paul A., Marioni, John C., Ruhrberg, Christiana, Tuong, Zewen Kelvin, Clatworthy, Menna R., Reading, James L., Janes, Sam M., Teichmann, Sarah A., Meyer, Kerstin B., Nikolić, Marko Z.
Pubblicato in Sci Immunol (2023)

Single-cell multi-omics analysis of the immune response in COVID-19

di Stephenson, Emily, Reynolds, Gary, Botting, Rachel A., Calero-Nieto, Fernando J., Morgan, Michael D., Tuong, Zewen Kelvin, Bach, Karsten, Sungnak, Waradon, Worlock, Kaylee B., Yoshida, Masahiro, Kumasaka, Natsuhiko, Kania, Katarzyna, Engelbert, Justin, Olabi, Bayanne, Spegarova, Jarmila Stremenova, Wilson, Nicola K., Mende, Nicole, Jardine, Laura, Gardner, Louis C. S., Goh, Issac, Horsfall, Dave, McGrath, Jim, Webb, Simone, Mather, Michael W., Lindeboom, Rik G. H., Dann, Emma, Huang, Ni, Polanski, Krzysztof, Prigmore, Elena, Gothe, Florian, Scott, Jonathan, Payne, Rebecca P., Baker, Kenneth F., Hanrath, Aidan T., Schim van der Loeff, Ina C. D., Barr, Andrew S., Sanchez-Gonzalez, Amada, Bergamaschi, Laura, Mescia, Federica, Barnes, Josephine L., Kilich, Eliz, de Wilton, Angus, Saigal, Anita, Saleh, Aarash, Janes, Sam M., Smith, Claire M., Gopee, Nusayhah, Wilson, Caroline, Coupland, Paul, Coxhead, Jonathan M., Kiselev, Vladimir Yu, van Dongen, Stijn, Bacardit, Jaume, King, Hamish W., Rostron, Anthony J., Simpson, A. John, Hambleton, Sophie, Laurenti, Elisa, Lyons, Paul A., Meyer, Kerstin B., Nikolić, Marko Z., Duncan, Christopher J. A., Smith, Kenneth G. C., Teichmann, Sarah A., Clatworthy, Menna R., Marioni, John C., Göttgens, Berthold, Haniffa, Muzlifah
Pubblicato in Nat Med (2021)