Phosphopeptide Fragmentation and Site Localization by Mass Spectrometry: An Update

por Potel, Clement M., Lemeer, Simone, Heck, Albert J. R.
Publicado en Anal Chem (2018)

Differential oxidation of protein-tyrosine phosphatases during zebrafish caudal fin regeneration

por Wu, Wei, Hale, Alexander James, Lemeer, Simone, den Hertog, Jeroen
Publicado en Sci Rep (2017)

Comprehensive and Reproducible Phosphopeptide Enrichment Using Iron Immobilized Metal Ion Affinity Chromatography (Fe-IMAC) Columns

por Ruprecht, Benjamin, Koch, Heiner, Medard, Guillaume, Mundt, Max, Kuster, Bernhard, Lemeer, Simone
Publicado en Mol Cell Proteomics (2015)

Defeating Major Contaminants in Fe(3+)- Immobilized Metal Ion Affinity Chromatography (IMAC) Phosphopeptide Enrichment

por Potel, Clement M., Lin, Miao-Hsia, Heck, Albert J. R., Lemeer, Simone
Publicado en Mol Cell Proteomics (2018)

Thermal Proteome Profiling in Zebrafish Reveals Effects of Napabucasin on Retinoic Acid Metabolism

por Leijten, Niels M., Bakker, Petra, Spaink, Herman P., den Hertog, Jeroen, Lemeer, Simone
Publicado en Mol Cell Proteomics (2021)

CTGF/VEGFA-activated Fibroblasts Promote Tumor Migration Through Micro-environmental Modulation

por Wu, Wei, Zaal, Esther A., Berkers, Celia R., Lemeer, Simone, Heck, Albert J. R.
Publicado en Mol Cell Proteomics (2018)

Confident Phosphorylation Site Localization Using the Mascot Delta Score

por Savitski, Mikhail M., Lemeer, Simone, Boesche, Markus, Lang, Manja, Mathieson, Toby, Bantscheff, Marcus, Kuster, Bernhard
Publicado 2011

Protein-Tyrosine Kinase Activity Profiling in Knock Down Zebrafish Embryos

por Lemeer, Simone, Jopling, Chris, Naji, Faris, Ruijtenbeek, Rob, Slijper, Monique, Heck, Albert J.R., den Hertog, Jeroen
Publicado 2007

In-Depth Characterization of the Staphylococcus aureus Phosphoproteome Reveals New Targets of Stk1

por Prust, Nadine, van der Laarse, Saar, van den Toorn, Henk W.P., van Sorge, Nina M., Lemeer, Simone
Publicado en Mol Cell Proteomics (2021)

A New Tool to Reveal Bacterial Signaling Mechanisms in Antibiotic Treatment and Resistance

por Lin, Miao-Hsia, Potel, Clement M., Tehrani, Kamaleddin H. M. E., Heck, Albert J. R., Martin, Nathaniel I., Lemeer, Simone
Publicado en Mol Cell Proteomics (2018)

Gaining Confidence in the Elusive Histidine Phosphoproteome

por Potel, Clement M., Lin, Miao-Hsia, Prust, Nadine, van den Toorn, Henk W. P., Heck, Albert J. R., Lemeer, Simone
Publicado en Anal Chem (2019)

Quantitative Chemical Proteomics Reveals New Potential Drug Targets in Head and Neck Cancer

por Wu, Zhixiang, Doondeea, Jessica B., Gholami, Amin Moghaddas, Janning, Melanie C., Lemeer, Simone, Kramer, Karl, Eccles, Suzanne A., Gollin, Susanne M., Grenman, Reidar, Walch, Axel, Feller, Stephan M., Kuster, Bernhard
Publicado 2011

Tyrosine Phosphorylation Profiling in FGF-2 Stimulated Human Embryonic Stem Cells

por Ding, Vanessa M. Y., Boersema, Paul J., Foong, Leong Yan, Preisinger, Christian, Koh, Geoffrey, Natarajan, Subaashini, Lee, Dong-Yup, Boekhorst, Jos, Snel, Berend, Lemeer, Simone, Heck, Albert J. R., Choo, Andre
Publicado 2011

In-depth Qualitative and Quantitative Profiling of Tyrosine Phosphorylation Using a Combination of Phosphopeptide Immunoaffinity Purification and Stable Isotope Dimethyl Labeling

por Boersema, Paul J., Foong, Leong Yan, Ding, Vanessa M. Y., Lemeer, Simone, van Breukelen, Bas, Philp, Robin, Boekhorst, Jos, Snel, Berend, den Hertog, Jeroen, Choo, Andre B. H., Heck, Albert J. R.
Publicado 2010

Ion Mobility Tandem Mass Spectrometry Enhances Performance of Bottom-up Proteomics

por Helm, Dominic, Vissers, Johannes P. C., Hughes, Christopher J., Hahne, Hannes, Ruprecht, Benjamin, Pachl, Fiona, Grzyb, Arkadiusz, Richardson, Keith, Wildgoose, Jason, Maier, Stefan K., Marx, Harald, Wilhelm, Mathias, Becher, Isabelle, Lemeer, Simone, Bantscheff, Marcus, Langridge, James I., Kuster, Bernhard
Publicado en Mol Cell Proteomics (2014)

Multi-OMIC profiling of survival and metabolic signaling networks in cells subjected to photodynamic therapy

por Weijer, Ruud, Clavier, Séverine, Zaal, Esther A., Pijls, Maud M. E., van Kooten, Robert T., Vermaas, Klaas, Leen, René, Jongejan, Aldo, Moerland, Perry D., van Kampen, Antoine H. C., van Kuilenburg, André B. P., Berkers, Celia R., Lemeer, Simone, Heger, Michal
Publicado en Cell Mol Life Sci (2016)

The IMiD target CRBN determines HSP90 activity toward transmembrane proteins essential in multiple myeloma

por Heider, Michael, Eichner, Ruth, Stroh, Jacob, Morath, Volker, Kuisl, Anna, Zecha, Jana, Lawatscheck, Jannis, Baek, Kheewoong, Garz, Anne-Kathrin, Rudelius, Martina, Deuschle, Friedrich-Christian, Keller, Ulrich, Lemeer, Simone, Verbeek, Mareike, Götze, Katharina S., Skerra, Arne, Weber, Wolfgang A., Buchner, Johannes, Schulman, Brenda A., Kuster, Bernhard, Fernández-Sáiz, Vanesa, Bassermann, Florian
Publicado en Mol Cell (2021)

RANK signaling increases after anti-HER2 therapy contributing to the emergence of resistance in HER2-positive breast cancer

por Sanz-Moreno, Adrián, Palomeras, Sonia, Pedersen, Kim, Morancho, Beatriz, Pascual, Tomas, Galván, Patricia, Benítez, Sandra, Gomez-Miragaya, Jorge, Ciscar, Marina, Jimenez, Maria, Pernas, Sonia, Petit, Anna, Soler-Monsó, María Teresa, Viñas, Gemma, Alsaleem, Mansour, Rakha, Emad A., Green, Andrew R., Santamaria, Patricia G., Mulder, Celine, Lemeer, Simone, Arribas, Joaquin, Prat, Aleix, Puig, Teresa, Gonzalez-Suarez, Eva
Publicado en Breast Cancer Res (2021)

Loss of the Fanconi anemia–associated protein NIPA causes bone marrow failure

por Kreutmair, Stefanie, Erlacher, Miriam, Andrieux, Geoffroy, Istvanffy, Rouzanna, Mueller-Rudorf, Alina, Zwick, Melissa, Rückert, Tamina, Pantic, Milena, Poggio, Teresa, Shoumariyeh, Khalid, Mueller, Tony A., Kawaguchi, Hiroyuki, Follo, Marie, Klingeberg, Cathrin, Wlodarski, Marcin, Baumann, Irith, Pfeifer, Dietmar, Kulinski, Michal, Rudelius, Martina, Lemeer, Simone, Kuster, Bernhard, Dierks, Christine, Peschel, Christian, Cabezas-Wallscheid, Nina, Duque-Afonso, Jesus, Zeiser, Robert, Cleary, Michael L., Schindler, Detlev, Schmitt-Graeff, Annette, Boerries, Melanie, Niemeyer, Charlotte M., Oostendorp, Robert A.J., Duyster, Justus, Illert, Anna Lena
Publicado en J Clin Invest (2020)