TagDust2: a generic method to extract reads from sequencing data

von Lassmann, Timo
Veröffentlicht in BMC Bioinformatics (2015)

Kalign 3: multiple sequence alignment of large datasets

von Lassmann, Timo
Veröffentlicht in Bioinformatics (2020)

A phenotype centric benchmark of variant prioritisation tools

von Anderson, Denise, Lassmann, Timo
Veröffentlicht in NPJ Genom Med (2018)

Kalign – an accurate and fast multiple sequence alignment algorithm

von Lassmann, Timo, Sonnhammer, Erik LL
Veröffentlicht 2005

Automatic extraction of reliable regions from multiple sequence alignments

von Lassmann, Timo, Sonnhammer, Erik LL
Veröffentlicht 2007

Automatic assessment of alignment quality

von Lassmann, Timo, Sonnhammer, Erik L. L.
Veröffentlicht 2005

Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment

von Lassmann, Timo, Sonnhammer, Erik L. L.
Veröffentlicht 2006

TagDust—a program to eliminate artifacts from next generation sequencing data

von Lassmann, Timo, Hayashizaki, Yoshihide, Daub, Carsten O.
Veröffentlicht 2009

SAMStat: monitoring biases in next generation sequencing data

von Lassmann, Timo, Hayashizaki, Yoshihide, Daub, Carsten O.
Veröffentlicht 2011

Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features

von Lassmann, Timo, Frings, Oliver, Sonnhammer, Erik L. L.
Veröffentlicht 2009

5’ end-centered expression profiling using Cap-analysis gene expression (CAGE) and next-generation sequencing

von Takahashi, Hazuki, Lassmann, Timo, Murata, Mitsuyoshi, Carninci, Piero
Veröffentlicht 2012

Personalised analytics for rare disease diagnostics

von Anderson, Denise, Baynam, Gareth, Blackwell, Jenefer M., Lassmann, Timo
Veröffentlicht in Nat Commun (2019)

Off-Target Effect of Endogenous siRNA Derived from RMRP in Human Cells

von Maida, Yoshiko, Kyo, Satoru, Lassmann, Timo, Hayashizaki, Yoshihide, Masutomi, Kenkichi
Veröffentlicht 2013

MOIRAI: a compact workflow system for CAGE analysis

von Hasegawa, Akira, Daub, Carsten, Carninci, Piero, Hayashizaki, Yoshihide, Lassmann, Timo
Veröffentlicht 2014

Elucidating the Interaction of CF Airway Epithelial Cells and Rhinovirus: Using the Host-Pathogen Relationship to Identify Future Therapeutic Strategies

von Ling, Kak-Ming, Garratt, Luke W., Lassmann, Timo, Stick, Stephen M., Kicic, Anthony
Veröffentlicht in Front Pharmacol (2018)

Small RNAs derived from snoRNAs

von Taft, Ryan J., Glazov, Evgeny A., Lassmann, Timo, Hayashizaki, Yoshihide, Carninci, Piero, Mattick, John S.
Veröffentlicht 2009

CAGEd-oPOSSUM: motif enrichment analysis from CAGE-derived TSSs

von Arenillas, David J., Forrest, Alistair R. R., Kawaji, Hideya, Lassmann, Timo, Wasserman, Wyeth W., Mathelier, Anthony
Veröffentlicht in Bioinformatics (2016)

Reference genotype and exome data from an Australian Aboriginal population for health-based research

von Tang, Dave, Anderson, Denise, Francis, Richard W., Syn, Genevieve, Jamieson, Sarra E., Lassmann, Timo, Blackwell, Jenefer M.
Veröffentlicht in Sci Data (2016)

RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE)

von Ohmiya, Hiroko, Vitezic, Morana, Frith, Martin C, Itoh, Masayoshi, Carninci, Piero, Forrest, Alistair RR, Hayashizaki, Yoshihide, Lassmann, Timo
Veröffentlicht 2014

The human PINK1 locus is regulated in vivo by a non-coding natural antisense RNA during modulation of mitochondrial function

von Scheele, Camilla, Petrovic, Natasa, Faghihi, Mohammad A, Lassmann, Timo, Fredriksson, Katarina, Rooyackers, Olav, Wahlestedt, Claes, Good, Liam, Timmons, James A
Veröffentlicht 2007