mGrid: A load-balanced distributed computing environment for the remote execution of the user-defined Matlab code

di Karpievitch, Yuliya V, Almeida, Jonas S
Pubblicazione 2006

Normalization and missing value imputation for label-free LC-MS analysis

di Karpievitch, Yuliya V, Dabney, Alan R, Smith, Richard D
Pubblicazione 2012

HOME: a histogram based machine learning approach for effective identification of differentially methylated regions

di Srivastava, Akanksha, Karpievitch, Yuliya V., Eichten, Steven R., Borevitz, Justin O., Lister, Ryan
Pubblicato in BMC Bioinformatics (2019)

An Introspective Comparison of Random Forest-Based Classifiers for the Analysis of Cluster-Correlated Data by Way of RF++

di Karpievitch, Yuliya V., Hill, Elizabeth G., Leclerc, Anthony P., Dabney, Alan R., Almeida, Jonas S.
Pubblicazione 2009

Metabolomics Data Normalization with EigenMS

di Karpievitch, Yuliya V., Nikolic, Sonja B., Wilson, Richard, Sharman, James E., Edwards, Lindsay M.
Pubblicato in PLoS One (2014)

Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects

di Karpievitch, Yuliya V., Polpitiya, Ashoka D., Anderson, Gordon A., Smith, Richard D., Dabney, Alan R.
Pubblicazione 2010

Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation

di Stuart, Tim, Eichten, Steven R, Cahn, Jonathan, Karpievitch, Yuliya V, Borevitz, Justin O, Lister, Ryan
Pubblicato in eLife (2016)

PrepMS: TOF MS Data Graphical Preprocessing Tool

di Karpievitch, Yuliya V., Hill, Elizabeth G., Smolka, Adam J., Morris, Jeffrey S., Coombes, Kevin R., Baggerly, Keith A., Almeida, Jonas S.
Pubblicazione 2006

Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

di Karpievitch, Yuliya V., Taverner, Thomas, Adkins, Joshua N., Callister, Stephen J., Anderson, Gordon A., Smith, Richard D., Dabney, Alan R.
Pubblicazione 2009

DanteR: an extensible R-based tool for quantitative analysis of -omics data

di Taverner, Tom, Karpievitch, Yuliya V., Polpitiya, Ashoka D., Brown, Joseph N., Dabney, Alan R., Anderson, Gordon A., Smith, Richard D.
Pubblicazione 2012

Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination

di Narsai, Reena, Gouil, Quentin, Secco, David, Srivastava, Akanksha, Karpievitch, Yuliya V., Liew, Lim Chee, Lister, Ryan, Lewsey, Mathew G., Whelan, James
Pubblicato in Genome Biol (2017)

A statistical method for assessing peptide identification confidence in accurate mass and time tag proteomics

di Stanley, Jeffrey R., Adkins, Joshua N., Slysz, Gordon W., Monroe, Matthew E., Purvine, Samuel O., Karpievitch, Yuliya V., Anderson, Gordon A., Smith, Richard D., Dabney, Alan R.
Pubblicazione 2011

Label-Free Quantitative LC-MS Proteomics of Alzheimer’s Disease and Normally Aged Human Brains

di Andreev, Victor P., Petyuk, Vladislav A., Brewer, Heather M., Karpievitch, Yuliya V., Xie, Fang, Clarke, Jennifer, Camp, David, Smith, Richard D., Lieberman, Andrew P., Albin, Roger L., Nawaz, Zafar, El Hokayem, Jimmy, Myers, Amanda J.
Pubblicazione 2012

Aberrant cell migration contributes to defective airway epithelial repair in childhood wheeze

di Iosifidis, Thomas, Sutanto, Erika N., Buckley, Alysia G., Coleman, Laura, Gill, Erin E., Lee, Amy H., Ling, Kak-Ming, Hillas, Jessica, Looi, Kevin, Garratt, Luke W., Martinovich, Kelly M., Shaw, Nicole C., Montgomery, Samuel T., Kicic-Starcevich, Elizabeth, Karpievitch, Yuliya V., Le Souëf, Peter, Laing, Ingrid A., Vijayasekaran, Shyan, Lannigan, Francis J., Rigby, Paul J., Hancock, Robert E.W., Knight, Darryl A., Stick, Stephen M., Kicic., Anthony
Pubblicato in JCI Insight (2020)