GCOD - GeneChip Oncology Database

od Liu, Fenglong, White, Joseph A, Antonescu, Corina, Gusenleitner, Daniel, Quackenbush, John
Izdano 2011

iBBiG: iterative binary bi-clustering of gene sets

od Gusenleitner, Daniel, Howe, Eleanor A., Bentink, Stefan, Quackenbush, John, Culhane, Aedín C.
Izdano 2012

RamiGO: an R/Bioconductor package providing an AmiGO Visualize interface

od Schröder, Markus S., Gusenleitner, Daniel, Quackenbush, John, Culhane, Aedín C., Haibe-Kains, Benjamin
Izdano 2013

Genomic Models of Short-Term Exposure Accurately Predict Long-Term Chemical Carcinogenicity and Identify Putative Mechanisms of Action

od Gusenleitner, Daniel, Auerbach, Scott S., Melia, Tisha, Gómez, Harold F., Sherr, David H., Monti, Stefano
Izdano 2014

ASSIGN: context-specific genomic profiling of multiple heterogeneous biological pathways

od Shen, Ying, Rahman, Mumtahena, Piccolo, Stephen R., Gusenleitner, Daniel, El-Chaar, Nader N., Cheng, Luis, Monti, Stefano, Bild, Andrea H., Johnson, W. Evan
Izdano u Bioinformatics (2015)

Distinct predictive biomarker candidates for response to anti-CTLA-4 and anti-PD-1 immunotherapy in melanoma patients

od Subrahmanyam, Priyanka B., Dong, Zhiwan, Gusenleitner, Daniel, Giobbie-Hurder, Anita, Severgnini, Mariano, Zhou, Jun, Manos, Michael, Eastman, Lauren M., Maecker, Holden T., Hodi, F. Stephen
Izdano u J Immunother Cancer (2018)

An Aryl Hydrocarbon Receptor-Mediated Amplification Loop That Enforces Cell Migration in ER(−)/PR(−)/Her2(−) Human Breast Cancer Cells

od Novikov, Olga, Wang, Zhongyan, Stanford, Elizabeth A., Parks, Ashley J., Ramirez-Cardenas, Alejandra, Landesman, Esther, Laklouk, Israa, Sarita-Reyes, Carmen, Gusenleitner, Daniel, Li, Amy, Monti, Stefano, Manteiga, Sara, Lee, Kyongbum, Sherr, David H.
Izdano u Mol Pharmacol (2016)

Targetable subsets of non-Hodgkin lymphoma in Malawi define therapeutic opportunities

od Morgan, Elizabeth A., Sweeney, M. Patrick, Tomoka, Tamiwe, Kopp, Nadja, Gusenleitner, Daniel, Redd, Robert A., Carey, Christopher D., Masamba, Leo, Kamiza, Steve, Pinkus, Geraldine S., Neuberg, Donna S., Rodig, Scott J., Milner, Danny A., Weinstock, David M.
Izdano u Blood Adv (2016)

Topological analysis reveals a PD-L1-associated microenvironmental niche for Reed-Sternberg cells in Hodgkin lymphoma

od Carey, Christopher D., Gusenleitner, Daniel, Lipschitz, Mikel, Roemer, Margaretha G. M., Stack, Edward C., Gjini, Evisa, Hu, Xihao, Redd, Robert, Freeman, Gordon J., Neuberg, Donna, Hodi, F. Stephen, Liu, Xiaole Shirley, Shipp, Margaret A., Rodig, Scott J.
Izdano u Blood (2017)

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures

od Culhane, Aedín C., Schröder, Markus S., Sultana, Razvan, Picard, Shaita C., Martinelli, Enzo N., Kelly, Caroline, Haibe-Kains, Benjamin, Kapushesky, Misha, St Pierre, Anne-Alyssa, Flahive, William, Picard, Kermshlise C., Gusenleitner, Daniel, Papenhausen, Gerald, O'Connor, Niall, Correll, Mick, Quackenbush, John
Izdano 2012

Molecular Classification of MYC-Driven B-Cell Lymphomas by Targeted Gene Expression Profiling of Fixed Biopsy Specimens

od Carey, Christopher D., Gusenleitner, Daniel, Chapuy, Bjoern, Kovach, Alexandra E., Kluk, Michael J., Sun, Heather H., Crossland, Rachel E., Bacon, Chris M., Rand, Vikki, Cin, Paola Dal, Le, Long P., Neuberg, Donna, Sohani, Aliyah R., Shipp, Margaret A., Monti, Stefano, Rodig, Scott J.
Izdano u J Mol Diagn (2015)

Diffuse large B-cell lymphoma patient-derived xenograft models capture the molecular and biological heterogeneity of the disease

od Chapuy, Bjoern, Cheng, Hongwei, Watahiki, Akira, Ducar, Matthew D., Tan, Yuxiang, Chen, Linfeng, Roemer, Margaretha G. M., Ouyang, Jing, Christie, Amanda L., Zhang, Liye, Gusenleitner, Daniel, Abo, Ryan P., Farinha, Pedro, von Bonin, Frederike, Thorner, Aaron R., Sun, Heather H., Gascoyne, Randy D., Pinkus, Geraldine S., van Hummelen, Paul, Wulf, Gerald G., Aster, Jon C., Weinstock, David M., Monti, Stefano, Rodig, Scott J., Wang, Yuzhuo, Shipp, Margaret A.
Izdano u Blood (2016)

Cancer-germline antigen expression discriminates clinical outcome to CTLA-4 blockade

od Shukla, Sachet A., Bachireddy, Pavan, Schilling, Bastian, Galonska, Christina, Zhan, Qian, Bango, Clyde, Langer, Rupert, Lee, Patrick C., Gusenleitner, Daniel, Keskin, Derin B., Babadi, Mehrtash, Mohammad, Arman, Gnirke, Andreas, Clement, Kendell, Cartun, Zachary J., Van Allen, Eliezer M., Miao, Diana, Huang, Ying, Snyder, Alexandra, Merghoub, Taha, Wolchok, Jedd D., Garraway, Levi A., Meissner, Alexander, Weber, Jeffrey S., Hacohen, Nir, Neuberg, Donna, Potts, Patrick R., Murphy, George F., Lian, Christine G., Schadendorf, Dirk, Hodi, F. Stephen, Wu, Catherine J
Izdano u Cell (2018)

Targetable genetic features of primary testicular and primary central nervous system lymphomas

od Chapuy, Bjoern, Roemer, Margaretha G. M., Stewart, Chip, Tan, Yuxiang, Abo, Ryan P., Zhang, Liye, Dunford, Andrew J., Meredith, David M., Thorner, Aaron R., Jordanova, Ekaterina S., Liu, Gang, Feuerhake, Friedrich, Ducar, Matthew D., Illerhaus, Gerald, Gusenleitner, Daniel, Linden, Erica A., Sun, Heather H., Homer, Heather, Aono, Miyuki, Pinkus, Geraldine S., Ligon, Azra H., Ligon, Keith L., Ferry, Judith A., Freeman, Gordon J., van Hummelen, Paul, Golub, Todd R., Getz, Gad, Rodig, Scott J., de Jong, Daphne, Monti, Stefano, Shipp, Margaret A.
Izdano u Blood (2016)