PTMphinder: an R package for PTM site localization and motif extraction from proteomic datasets

অনুযায়ী Wozniak, Jacob M., Gonzalez, David J.
প্রকাশিত PeerJ (2019)

AssessORF: combining evolutionary conservation and proteomics to assess prokaryotic gene predictions

অনুযায়ী Korandla, Deepank R, Wozniak, Jacob M, Campeau, Anaamika, Gonzalez, David J, Wright, Erik S
প্রকাশিত Bioinformatics (2019)

Quantitative Temporal Viromics of an Inducible HIV-1 Model Yields Insight to Global Host Targets and Phospho-Dynamics Associated with Protein Vpr

অনুযায়ী Lapek, John D., Lewinski, Mary K., Wozniak, Jacob M., Guatelli, John, Gonzalez, David J.
প্রকাশিত Mol Cell Proteomics (2017)

Identification of the S-transferase like superfamily bacillithiol transferases encoded by Bacillus subtilis

অনুযায়ী Perera, Varahenage R., Lapek, John D., Newton, Gerald L., Gonzalez, David J., Pogliano, Kit
প্রকাশিত PLoS One (2018)

CLK1 reorganizes the splicing factor U1-70K for early spliceosomal protein assembly

অনুযায়ী Aubol, Brandon E., Wozniak, Jacob M., Fattet, Laurent, Gonzalez, David J., Adams, Joseph A.
প্রকাশিত Proc Natl Acad Sci U S A (2021)

N-Terminal ArgD Peptides from the Classical Staphylococcus aureus Agr System have cytotoxic and proinflammatory activities

অনুযায়ী Gonzalez, David J., Corriden, Ross, Akong-Moore, Kathryn, Olson, Joshua, Dorrestein, Pieter C., Nizet, Victor
প্রকাশিত Chem Biol (2014)

Exposure of Mycobacterium abscessus to Environmental Stress and Clinically Used Antibiotics Reveals Common Proteome Response among Pathogenic Mycobacteria

অনুযায়ী Rojony, Rajoana, Danelishvili, Lia, Campeau, Anaamika, Wozniak, Jacob M., Gonzalez, David J., Bermudez, Luiz E.
প্রকাশিত Microorganisms (2020)

Dissociation of DNA damage sensing by endoglycosidase HPSE

অনুযায়ী Agelidis, Alex, Suryawanshi, Rahul K., Patil, Chandrashekhar D., Campeau, Anaamika, Gonzalez, David J., Shukla, Deepak
প্রকাশিত iScience (2021)

Tamoxifen Augments the Innate Immune Function of Neutrophils Through Modulation of Intracellular Ceramide

অনুযায়ী Corriden, Ross, Hollands, Andrew, Olson, Joshua, Derieux, Jaclyn, Lopez, Justine, Chang, John T., Gonzalez, David J., Nizet, Victor
প্রকাশিত Nat Commun (2015)

Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules

অনুযায়ী Kersten, Roland D., Ziemert, Nadine, Gonzalez, David J., Duggan, Brendan M., Nizet, Victor, Dorrestein, Pieter C., Moore, Bradley S.
প্রকাশিত 2013

Quantitative analysis of Mycobacterium avium subsp. hominissuis proteome in response to antibiotics and during exposure to different environmental conditions

অনুযায়ী Rojony, Rajoana, Martin, Matthew, Campeau, Anaamika, Wozniak, Jacob M., Gonzalez, David J., Jaiswal, Pankaj, Danelishvili, L., Bermudez, Luiz E.
প্রকাশিত Clin Proteomics (2019)

Organ-level protein networks as a reference for the host effects of the microbiome

অনুযায়ী Mills, Robert H., Wozniak, Jacob M., Vrbanac, Alison, Campeau, Anaamika, Chassaing, Benoit, Gewirtz, Andrew, Knight, Rob, Gonzalez, David J.
প্রকাশিত Genome Res (2020)

Microbial competition between Bacillus subtilis and Staphylococcus aureus monitored by imaging mass spectrometry

অনুযায়ী Gonzalez, David J., Haste, Nina M., Hollands, Andrew, Fleming, Tinya C., Hamby, Matthew, Pogliano, Kit, Nizet, Victor, Dorrestein, Pieter C.
প্রকাশিত 2011

Direct cloning and refactoring of a silent lipopeptide biosynthetic gene cluster yields the antibiotic taromycin A

অনুযায়ী Yamanaka, Kazuya, Reynolds, Kirk A., Kersten, Roland D., Ryan, Katherine S., Gonzalez, David J., Nizet, Victor, Dorrestein, Pieter C., Moore, Bradley S.
প্রকাশিত 2014

Identification of a human skin commensal bacterium that selectively kills Cutibacterium acnes

অনুযায়ী O’Neill, Alan M., Nakatsuji, Teruaki, Hayachi, Asumi, Williams, Michael R., Mills, Robert H., Gonzalez, David J., Gallo, Richard L.
প্রকাশিত J Invest Dermatol (2020)

A Cdk4/6-dependent phosphorylation gradient regulates the early to late G1 phase transition

অনুযায়ী Kaulich, Manuel, Link, Verena M., Lapek, John D., Lee, Yeon J., Glass, Christopher K., Gonzalez, David J., Dowdy, Steven F.
প্রকাশিত Sci Rep (2021)

Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease

অনুযায়ী Mills, Robert H., Vázquez-Baeza, Yoshiki, Zhu, Qiyun, Jiang, Lingjing, Gaffney, James, Humphrey, Greg, Smarr, Larry, Knight, Rob, Gonzalez, David J.
প্রকাশিত mSystems (2019)

Fermentable fiber-induced hepatocellular carcinoma in mice recapitulates gene signatures found in human liver cancer

অনুযায়ী Chandrashekar, Darshan Shimoga, Golonka, Rachel M., Yeoh, Beng San, Gonzalez, David J., Heikenwälder, Mathias, Gerwirtz, Andrew T., Varambally, Sooryanarayana, Vijay-Kumar, Matam
প্রকাশিত PLoS One (2020)

The tumor suppressor kinase DAPK3 drives tumor-intrinsic immunity through the STING–IFN-β pathway

অনুযায়ী Takahashi, Mariko, Lio, Chan-Wang J., Campeau, Anaamika, Steger, Martin, Ay, Ferhat, Mann, Matthias, Gonzalez, David J., Jain, Mohit, Sharma, Sonia
প্রকাশিত Nat Immunol (2021)

Optimization of carbon and energy utilization through differential translational efficiency

অনুযায়ী Al-Bassam, Mahmoud M., Kim, Ji-Nu, Zaramela, Livia S., Kellman, Benjamin P., Zuniga, Cristal, Wozniak, Jacob M., Gonzalez, David J., Zengler, Karsten
প্রকাশিত Nat Commun (2018)