Using the Unfolded State as the Reference State Improves the Performance of Statistical Potentials

Por Liu, Yufeng, Gong, Haipeng
Publicado em 2012

Theoretical and simulation studies on voltage-gated sodium channels

Por Li, Yang, Gong, Haipeng
Publicado no Protein Cell (2015)

Assessing the solvent-dependent surface area of unfolded proteins using an ensemble model

Por Gong, Haipeng, Rose, George D.
Publicado em 2008

Electrostatic Solvation Energy for Two Oppositely Charged Ions in a Solvated Protein System: Salt Bridges Can Stabilize Proteins

Por Gong, Haipeng, Freed, Karl F.
Publicado em 2010

Protonation of Glu(135) Facilitates the Outward-to-Inward Structural Transition of Fucose Transporter

Por Liu, Yufeng, Ke, Meng, Gong, Haipeng
Publicado no Biophys J (2015)

Building native protein conformation from NMR backbone chemical shifts using Monte Carlo fragment assembly

Por Gong, Haipeng, Shen, Yang, Rose, George D.
Publicado em 2007

Influence of nonlinear electrostatics on transfer energies between liquid phases: Charge burial is far less expensive than Born model

Por Gong, Haipeng, Hocky, Glen, Freed, Karl F.
Publicado em 2008

Building native protein conformation from highly approximate backbone torsion angles

Por Gong, Haipeng, Fleming, Patrick J., Rose, George D.
Publicado em 2005

Secondary structure determines protein topology

Por Fleming, Patrick J., Gong, Haipeng, Rose, George D.
Publicado em 2006

Counting peptide-water hydrogen bonds in unfolded proteins

Por Gong, Haipeng, Porter, Lauren L, Rose, George D
Publicado em 2011

Exploring the pH-Dependent Substrate Transport Mechanism of FocA Using Molecular Dynamics Simulation

Por Lv, Xiaoying, Liu, Huihui, Ke, Meng, Gong, Haipeng
Publicado em 2013

Lysine and the Na(+)/K(+) Selectivity in Mammalian Voltage-Gated Sodium Channels

Por Li, Yang, Liu, Huihui, Xia, Mengdie, Gong, Haipeng
Publicado no PLoS One (2016)

The Mechanism of Na(+)/K(+) Selectivity in Mammalian Voltage-Gated Sodium Channels Based on Molecular Dynamics Simulation

Por Xia, Mengdie, Liu, Huihui, Li, Yang, Yan, Nieng, Gong, Haipeng
Publicado em 2013

Constructing Structure Ensembles of Intrinsically Disordered Proteins from Chemical Shift Data

Por Gong, Huichao, Zhang, Sai, Wang, Jiangdian, Gong, Haipeng, Zeng, Jianyang
Publicado no J Comput Biol (2016)

Molecular determinants for the thermodynamic and functional divergence of uniporter GLUT1 and proton symporter XylE

Por Ke, Meng, Yuan, Yafei, Jiang, Xin, Yan, Nieng, Gong, Haipeng
Publicado no PLoS Comput Biol (2017)

Large-scale molecular dynamics simulation of coupled dynamics of flow and glycocalyx: towards understanding atomic events on an endothelial cell surface

Por Jiang, Xi Zhuo, Gong, Haipeng, Luo, Kai Hong, Ventikos, Yiannis
Publicado no J R Soc Interface (2017)

A Novel Implicit Solvent Model for Simulating the Molecular Dynamics of RNA

Por Liu, Yufeng, Haddadian, Esmael, Sosnick, Tobin R., Freed, Karl F., Gong, Haipeng
Publicado em 2013

A deep learning framework for modeling structural features of RNA-binding protein targets

Por Zhang, Sai, Zhou, Jingtian, Hu, Hailin, Gong, Haipeng, Chen, Ligong, Cheng, Chao, Zeng, Jianyang
Publicado no Nucleic Acids Res (2016)

Extended structures in RNA folding intermediates are due to non-native interactions rather than electrostatic repulsion

Por Baird, Nathan J., Gong, Haipeng, Zaheer, Syed S., Freed, Karl F., Pan, Tao, Sosnick, Tobin R.
Publicado em 2010

A single residue substitution accounts for the significant difference in thermostability between two isoforms of human cytosolic creatine kinase

Por Liu, Huihui, Gao, Yan-Song, Chen, Xiang-Jun, Chen, Zhe, Zhou, Hai-Meng, Yan, Yong-Bin, Gong, Haipeng
Publicado no Sci Rep (2016)