Chemical-genetic profile analysis in yeast suggests that a previously uncharacterized open reading frame, YBR261C, affects protein synthesis

Por Alamgir, Md, Eroukova, Veronika, Jessulat, Matthew, Xu, Jianhua, Golshani, Ashkan
Publicado em 2008

Chemical-genetic profile analysis of five inhibitory compounds in yeast

Por Alamgir, Md, Erukova, Veronika, Jessulat, Matthew, Azizi, Ali, Golshani, Ashkan
Publicado em 2010

Novel coding, translation, and gene expression of a replicating covalently closed circular RNA of 220 nt

Por AbouHaidar, Mounir Georges, Venkataraman, Srividhya, Golshani, Ashkan, Liu, Bolin, Ahmad, Tauqeer
Publicado em 2014

The Antifungal Eugenol Perturbs Dual Aromatic and Branched-Chain Amino Acid Permeases in the Cytoplasmic Membrane of Yeast

Por Darvishi, Emad, Omidi, Mansoor, Bushehri, Ali Akbar Shahnejat, Golshani, Ashkan, Smith, Myron L.
Publicado em 2013

Colony size measurement of the yeast gene deletion strains for functional genomics

Por Memarian, Negar, Jessulat, Matthew, Alirezaie, Javad, Mir-Rashed, Nadereh, Xu, Jianhua, Zareie, Mehri, Smith, Myron, Golshani, Ashkan
Publicado em 2007

Computational approaches toward the design of pools for the in vitro selection of complex aptamers

Por Luo, Xuemei, Mckeague, Maureen, Pitre, Sylvain, Dumontier, Michel, Green, James, Golshani, Ashkan, Derosa, Maria C., Dehne, Frank
Publicado em 2010

Short Co-occurring Polypeptide Regions Can Predict Global Protein Interaction Maps

Por Pitre, Sylvain, Hooshyar, Mohsen, Schoenrock, Andrew, Samanfar, Bahram, Jessulat, Matthew, Green, James R., Dehne, Frank, Golshani, Ashkan
Publicado em 2012

Elevated levels of ribosomal proteins eL36 and eL42 control expression of Hsp90 in rhabdomyosarcoma

Por Shaikho, Sarah, Dobson, Christine C., Naing, Thet, Samanfar, Bahram, Moteshareie, Houman, Hajikarimloo, Maryam, Golshani, Ashkan, Holcik, Martin
Publicado no Translation (Austin) (2016)

Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences

Por Amos-Binks, Adam, Patulea, Catalin, Pitre, Sylvain, Schoenrock, Andrew, Gui, Yuan, Green, James R, Golshani, Ashkan, Dehne, Frank
Publicado em 2011

Evolution of protein-protein interaction networks in yeast

Por Schoenrock, Andrew, Burnside, Daniel, Moteshareie, Houman, Pitre, Sylvain, Hooshyar, Mohsen, Green, James R., Golshani, Ashkan, Dehne, Frank, Wong, Alex
Publicado no PLoS One (2017)

Phosphatase Complex Pph3/Psy2 Is Involved in Regulation of Efficient Non-Homologous End-Joining Pathway in the Yeast Saccharomyces cerevisiae

Por Omidi, Katayoun, Hooshyar, Mohsen, Jessulat, Matthew, Samanfar, Bahram, Sanders, Megan, Burnside, Daniel, Pitre, Sylvain, Schoenrock, Andrew, Xu, Jianhua, Babu, Mohan, Golshani, Ashkan
Publicado em 2014

PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs

Por Pitre, Sylvain, Dehne, Frank, Chan, Albert, Cheetham, Jim, Duong, Alex, Emili, Andrew, Gebbia, Marinella, Greenblatt, Jack, Jessulat, Mathew, Krogan, Nevan, Luo, Xuemei, Golshani, Ashkan
Publicado em 2006

Methylation of Histone H3 by Set2 in Saccharomyces cerevisiae Is Linked to Transcriptional Elongation by RNA Polymerase II

Por Krogan, Nevan J., Kim, Minkyu, Tong, Amy, Golshani, Ashkan, Cagney, Gerard, Canadien, Veronica, Richards, Dawn P., K. Beattie, Bryan, Emili, Andrew, Boone, Charles, Shilatifard, Ali, Buratowski, Stephen, Greenblatt, Jack
Publicado em 2003

Ribosome-Dependent ATPase Interacts with Conserved Membrane Protein in Escherichia coli to Modulate Protein Synthesis and Oxidative Phosphorylation

Por Babu, Mohan, Aoki, Hiroyuki, Chowdhury, Wasimul Q., Gagarinova, Alla, Graham, Chris, Phanse, Sadhna, Laliberte, Ben, Sunba, Noor, Jessulat, Matthew, Golshani, Ashkan, Emili, Andrew, Greenblatt, Jack F., Ganoza, M. Clelia
Publicado em 2011

Efficient prediction of human protein-protein interactions at a global scale

Por Schoenrock, Andrew, Samanfar, Bahram, Pitre, Sylvain, Hooshyar, Mohsen, Jin, Ke, Phillips, Charles A, Wang, Hui, Phanse, Sadhna, Omidi, Katayoun, Gui, Yuan, Alamgir, Md, Wong, Alex, Barrenäs, Fredrik, Babu, Mohan, Benson, Mikael, Langston, Michael A, Green, James R, Dehne, Frank, Golshani, Ashkan
Publicado no BMC Bioinformatics (2014)

Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli

Por Vlasblom, James, Zuberi, Khalid, Rodriguez, Harold, Arnold, Roland, Gagarinova, Alla, Deineko, Viktor, Kumar, Ashwani, Leung, Elisa, Rizzolo, Kamran, Samanfar, Bahram, Chang, Luke, Phanse, Sadhna, Golshani, Ashkan, Greenblatt, Jack F., Houry, Walid A., Emili, Andrew, Morris, Quaid, Bader, Gary, Babu, Mohan
Publicado no Bioinformatics (2015)

Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining

Por Jessulat, Matthew, Malty, Ramy H., Nguyen-Tran, Diem-Hang, Deineko, Viktor, Aoki, Hiroyuki, Vlasblom, James, Omidi, Katayoun, Jin, Ke, Minic, Zoran, Hooshyar, Mohsen, Burnside, Daniel, Samanfar, Bahram, Phanse, Sadhna, Freywald, Tanya, Prasad, Bhanu, Zhang, Zhaolei, Vizeacoumar, Franco, Krogan, Nevan J., Freywald, Andrew, Golshani, Ashkan, Babu, Mohan
Publicado no Mol Cell Biol (2015)

Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins

Por Hu, Pingzhao, Janga, Sarath Chandra, Babu, Mohan, Díaz-Mejía, J. Javier, Butland, Gareth, Yang, Wenhong, Pogoutse, Oxana, Guo, Xinghua, Phanse, Sadhna, Wong, Peter, Chandran, Shamanta, Christopoulos, Constantine, Nazarians-Armavil, Anaies, Nasseri, Negin Karimi, Musso, Gabriel, Ali, Mehrab, Nazemof, Nazila, Eroukova, Veronika, Golshani, Ashkan, Paccanaro, Alberto, Greenblatt, Jack F, Moreno-Hagelsieb, Gabriel, Emili, Andrew
Publicado em 2009

Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways

Por Babu, Mohan, Díaz-Mejía, J. Javier, Vlasblom, James, Gagarinova, Alla, Phanse, Sadhna, Graham, Chris, Yousif, Fouad, Ding, Huiming, Xiong, Xuejian, Nazarians-Armavil, Anaies, Alamgir, Md, Ali, Mehrab, Pogoutse, Oxana, Pe'er, Asaf, Arnold, Roland, Michaut, Magali, Parkinson, John, Golshani, Ashkan, Whitfield, Chris, Wodak, Shoshana J., Moreno-Hagelsieb, Gabriel, Greenblatt, Jack F., Emili, Andrew
Publicado em 2011

Quantitative Genome-Wide Genetic Interaction Screens Reveal Global Epistatic Relationships of Protein Complexes in Escherichia coli

Por Babu, Mohan, Arnold, Roland, Bundalovic-Torma, Cedoljub, Gagarinova, Alla, Wong, Keith S., Kumar, Ashwani, Stewart, Geordie, Samanfar, Bahram, Aoki, Hiroyuki, Wagih, Omar, Vlasblom, James, Phanse, Sadhna, Lad, Krunal, Yeou Hsiung Yu, Angela, Graham, Christopher, Jin, Ke, Brown, Eric, Golshani, Ashkan, Kim, Philip, Moreno-Hagelsieb, Gabriel, Greenblatt, Jack, Houry, Walid A., Parkinson, John, Emili, Andrew
Publicado em 2014