Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems

Por Sean P. Jungbluth, Tijana Glavina del Rio, Susannah G. Tringe, Ramunas Stepanauskas, Michael S. Rappé
Publicado em 2017-04-01

Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems

Por Jungbluth, Sean P., Glavina del Rio, Tijana, Tringe, Susannah G., Stepanauskas, Ramunas, Rappé, Michael S.
Publicado no PeerJ (2017)

Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms

Por Hausmann, Bela, Knorr, Klaus-Holger, Schreck, Katharina, Tringe, Susannah G, Glavina del Rio, Tijana, Loy, Alexander, Pester, Michael
Publicado no ISME J (2016)

A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae

Por Beck, David A.C., Kalyuzhnaya, Marina G., Malfatti, Stephanie, Tringe, Susannah G., Glavina del Rio, Tijana, Ivanova, Natalia, Lidstrom, Mary E., Chistoserdova, Ludmila
Publicado em 2013

Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes

Por He, Shaomei, Stevens, Sarah L. R., Chan, Leong-Keat, Bertilsson, Stefan, Glavina del Rio, Tijana, Tringe, Susannah G., Malmstrom, Rex R., McMahon, Katherine D.
Publicado no mSphere (2017)

Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle

Por Scully, Erin D., Geib, Scott M., Hoover, Kelli, Tien, Ming, Tringe, Susannah G., Barry, Kerrie W., Glavina del Rio, Tijana, Chovatia, Mansi, Herr, Joshua R., Carlson, John E.
Publicado em 2013

Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1

Por Anderson, Iain J., Sun, Hui, Lapidus, Alla, Copeland, Alex, Glavina Del Rio, Tijana, Tice, Hope, Dalin, Eileen, Lucas, Susan, Barry, Kerrie, Land, Miriam, Richardson, Paul, Huber, Harald, Kyrpides, Nikos C.
Publicado em 2009

Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach

Por Gontang, Erin A., Aylward, Frank O., Carlos, Camila, Glavina del Rio, Tijana, Chovatia, Mansi, Fern, Alison, Lo, Chien-Chi, Malfatti, Stephanie A., Tringe, Susannah G., Currie, Cameron R., Kolter, Roberto
Publicado no PLoS One (2017)

Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions

Por He, Shaomei, Malfatti, Stephanie A., McFarland, Jack W., Anderson, Frank E., Pati, Amrita, Huntemann, Marcel, Tremblay, Julien, Glavina del Rio, Tijana, Waldrop, Mark P., Windham-Myers, Lisamarie, Tringe, Susannah G.
Publicado no mBio (2015)

Genomes of Three Methylotrophs from a Single Niche Reveal the Genetic and Metabolic Divergence of the Methylophilaceae

Por Lapidus, Alla, Clum, Alicia, LaButti, Kurt, Kaluzhnaya, Marina G., Lim, Sujung, Beck, David A. C., Glavina del Rio, Tijana, Nolan, Matt, Mavromatis, Konstantinos, Huntemann, Marcel, Lucas, Susan, Lidstrom, Mary E., Ivanova, Natalia, Chistoserdova, Ludmila
Publicado em 2011

Convergent Bacterial Microbiotas in the Fungal Agricultural Systems of Insects

Por Aylward, Frank O., Suen, Garret, Biedermann, Peter H. W., Adams, Aaron S., Scott, Jarrod J., Malfatti, Stephanie A., Glavina del Rio, Tijana, Tringe, Susannah G., Poulsen, Michael, Raffa, Kenneth F., Klepzig, Kier D., Currie, Cameron R.
Publicado no mBio (2014)

Complete genome sequence of Methanocorpusculum labreanum type strain Z

Por Anderson, Iain J., Sieprawska-Lupa, Magdalena, Goltsman, Eugene, Lapidus, Alla, Copeland, Alex, Glavina Del Rio, Tijana, Tice, Hope, Dalin, Eileen, Barry, Kerrie, Pitluck, Sam, Hauser, Loren, Land, Miriam, Lucas, Susan, Richardson, Paul, Whitman, William B., Kyrpides, Nikos C.
Publicado em 2009

Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California

Por Hawley, Erik R., Piao, Hailan, Scott, Nicole M., Malfatti, Stephanie, Pagani, Ioanna, Huntemann, Marcel, Chen, Amy, Glavina del Rio, Tijana, Foster, Brian, Copeland, Alex, Jansson, Janet, Pati, Amrita, Tringe, Susannah, Gilbert, Jack A., Lorenson, Thomas D., Hess, Matthias
Publicado em 2014

Complete Genome Sequence of a thermotolerant sporogenic lactic acid bacterium, Bacillus coagulans strain 36D1

Por Rhee, Mun Su, Moritz, Brélan E., Xie, Gary, Glavina del Rio, T., Dalin, E., Tice, H., Bruce, D., Goodwin, L., Chertkov, O., Brettin, T., Han, C., Detter, C., Pitluck, S., Land, Miriam L., Patel, Milind, Ou, Mark, Harbrucker, Roberta, Ingram, Lonnie O., Shanmugam, K. T.
Publicado em 2011

Trichodesmium genome maintains abundant, widespread noncoding DNA in situ, despite oligotrophic lifestyle

Por Walworth, Nathan, Pfreundt, Ulrike, Nelson, William C., Mincer, Tracy, Heidelberg, John F., Fu, Feixue, Waterbury, John B., Glavina del Rio, Tijana, Goodwin, Lynne, Kyrpides, Nikos C., Land, Miriam L., Woyke, Tanja, Hutchins, David A., Hess, Wolfgang R., Webb, Eric A.
Publicado no Proc Natl Acad Sci U S A (2015)

Diversity and Distribution of a Novel Genus of Hyperthermophilic Aquificae Viruses Encoding a Proof-Reading Family-A DNA Polymerase

Por Marike Palmer, Brian P. Hedlund, Brian P. Hedlund, Simon Roux, Philippos K. Tsourkas, Philippos K. Tsourkas, Ryan K. Doss, Casey Stamereilers, Astha Mehta, Jeremy A. Dodsworth, Michael Lodes, Scott Monsma, Tijana Glavina del Rio, Thomas W. Schoenfeld, Emiley A. Eloe-Fadrosh, David A. Mead
Publicado em 2020-11-01

Genome Sequence of Chthoniobacter flavus Ellin428, an Aerobic Heterotrophic Soil Bacterium

Por Kant, Ravi, van Passel, Mark W. J., Palva, Airi, Lucas, Susan, Lapidus, Alla, Glavina del Rio, Tijana, Dalin, Eileen, Tice, Hope, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Larimer, Frank W., Land, Miriam L., Hauser, Loren, Sangwan, Parveen, de Vos, Willem M., Janssen, Peter H., Smidt, Hauke
Publicado em 2011

Complete genome sequence of Methanoculleus marisnigri Romesser et al. 1981 type strain JR1

Por Anderson, Iain J., Sieprawska-Lupa, Magdalena, Lapidus, Alla, Nolan, Matt, Copeland, Alex, Glavina Del Rio, Tijana, Tice, Hope, Dalin, Eileen, Barry, Kerrie, Saunders, Elizabeth, Han, Cliff, Brettin, Thomas, Detter, John C., Bruce, David, Mikhailova, Natalia, Pitluck, Sam, Hauser, Loren, Land, Miriam, Lucas, Susan, Richardson, Paul, Whitman, William B., Kyrpides, Nikos C.
Publicado em 2009

Genome Sequence of the Verrucomicrobium Opitutus terrae PB90-1, an Abundant Inhabitant of Rice Paddy Soil Ecosystems

Por van Passel, Mark W. J., Kant, Ravi, Palva, Airi, Copeland, Alex, Lucas, Susan, Lapidus, Alla, Glavina del Rio, Tijana, Pitluck, Sam, Goltsman, Eugene, Clum, Alicia, Sun, Hui, Schmutz, Jeremy, Larimer, Frank W., Land, Miriam L., Hauser, Loren, Kyrpides, Nikolaos, Mikhailova, Natalia, Richardson, P. Paul, Janssen, Peter H., de Vos, Willem M., Smidt, Hauke
Publicado em 2011

Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds

Por Hwang, C., Copeland, A., Lucas, S., Lapidus, A., Barry, K., Detter, J. C., Glavina del Rio, T., Hammon, N., Israni, S., Dalin, E., Tice, H., Pitluck, S., Chertkov, O., Brettin, T., Bruce, D., Han, C., Schmutz, J., Larimer, F., Land, M. L., Hauser, L., Kyrpides, N., Mikhailova, N., Ye, Q., Zhou, J., Richardson, P., Fields, M. W.
Publicado no Genome Announc (2016)