Molecular correlates of immune cytolytic subgroups in colorectal cancer by integrated genomics analysis

Por Roufas, Constantinos, Georgakopoulos-Soares, Ilias, Zaravinos, Apostolos
Publicado no NAR Cancer (2021)

MPRAnator: a web-based tool for the design of massively parallel reporter assay experiments

Por Georgakopoulos-Soares, Ilias, Jain, Naman, Gray, Jesse M, Hemberg, Martin
Publicado no Bioinformatics (2017)

EMT Factors and Metabolic Pathways in Cancer

Por Georgakopoulos-Soares, Ilias, Chartoumpekis, Dionysios V., Kyriazopoulou, Venetsana, Zaravinos, Apostolos
Publicado no Front Oncol (2020)

Noncanonical secondary structures arising from non-B DNA motifs are determinants of mutagenesis

Por Georgakopoulos-Soares, Ilias, Morganella, Sandro, Jain, Naman, Hemberg, Martin, Nik-Zainal, Serena
Publicado no Genome Res (2018)

Asymmetron: a toolkit for the identification of strand asymmetry patterns in biological sequences

Por Georgakopoulos-Soares, Ilias, Mouratidis, Ioannis, Parada, Guillermo E, Matharu, Navneet, Hemberg, Martin, Ahituv, Nadav
Publicado no Nucleic Acids Res (2020)

Transcription-coupled repair and mismatch repair contribute towards preserving genome integrity at mononucleotide repeat tracts

Por Georgakopoulos-Soares, Ilias, Koh, Gene, Momen, Sophie E., Jiricny, Josef, Hemberg, Martin, Nik-Zainal, Serena
Publicado no Nat Commun (2020)

MicroExonator enables systematic discovery and quantification of microexons across mouse embryonic development

Por Parada, Guillermo E., Munita, Roberto, Georgakopoulos-Soares, Ilias, Fernandes, Hugo J. R., Kedlian, Veronika R., Metzakopian, Emmanouil, Andres, Maria Estela, Miska, Eric A., Hemberg, Martin
Publicado no Genome Biol (2021)

The Transcriptomic Response of the Murine Thyroid Gland to Iodide Overload and the Role of the Nrf2 Antioxidant System

Por Chartoumpekis, Dionysios V., Ziros, Panos G., Georgakopoulos-Soares, Ilias, Smith, Adam A. T., Marques, Ana Claudia, Ibberson, Mark, A. Kopp, Peter, Habeos, Ioannis, Trougakos, Ioannis P., Khoo, Nicholas K. H., Sykiotis, Gerasimos P.
Publicado no Antioxidants (Basel) (2020)

Deletion of CTCF sites in the SHH locus alters enhancer–promoter interactions and leads to acheiropodia

Por Ushiki, Aki, Zhang, Yichi, Xiong, Chenling, Zhao, Jingjing, Georgakopoulos-Soares, Ilias, Kane, Lauren, Jamieson, Kirsty, Bamshad, Michael J., Nickerson, Deborah A., Shen, Yin, Lettice, Laura A., Silveira-Lucas, Elizabeth Lemos, Petit, Florence, Ahituv, Nadav
Publicado no Nat Commun (2021)

A practical framework and online tool for mutational signature analyses show inter-tissue variation and driver dependencies

Por Degasperi, Andrea, Amarante, Tauanne Dias, Czarnecki, Jan, Shooter, Scott, Zou, Xueqing, Glodzik, Dominik, Morganella, Sandro, Nanda, Arjun S., Badja, Cherif, Koh, Gene, Momen, Sophie E., Georgakopoulos-Soares, Ilias, Dias, João M. L., Young, Jamie, Memari, Yasin, Davies, Helen, Nik-Zainal, Serena
Publicado no Nat Cancer (2020)

Characterizing Mutational Signatures in Human Cancer Cell Lines Reveals Episodic APOBEC Mutagenesis

Por Petljak, Mia, Alexandrov, Ludmil B., Brammeld, Jonathan S., Price, Stacey, Wedge, David C., Grossmann, Sebastian, Dawson, Kevin J., Ju, Young Seok, Iorio, Francesco, Tubio, Jose M.C., Koh, Ching Chiek, Georgakopoulos-Soares, Ilias, Rodríguez–Martín, Bernardo, Otlu, Burçak, O’Meara, Sarah, Butler, Adam P., Menzies, Andrew, Bhosle, Shriram G., Raine, Keiran, Jones, David R., Teague, Jon W., Beal, Kathryn, Latimer, Calli, O’Neill, Laura, Zamora, Jorge, Anderson, Elizabeth, Patel, Nikita, Maddison, Mark, Ng, Bee Ling, Graham, Jennifer, Garnett, Mathew J., McDermott, Ultan, Nik-Zainal, Serena, Campbell, Peter J., Stratton, Michael R.
Publicado no Cell (2019)