Next-Generation Sequencing of Small RNAs from HIV-Infected Cells Identifies Phased microRNA Expression Patterns and Candidate Novel microRNAs Differentially Expressed upon Infectio...

von Chang, Stewart T., Thomas, Matthew J., Sova, Pavel, Green, Richard R., Palermo, Robert E., Katze, Michael G.
Veröffentlicht 2013

Next-Generation Sequencing Reveals a Controlled Immune Response to Zaire Ebola Virus Challenge in Cynomolgus Macaques Immunized with Vesicular Stomatitis Virus Expressing Zaire Ebo...

von Barrenas, Fredrik, Green, Richard R., Thomas, Matthew J., Law, G. Lynn, Proll, Sean C., Engelmann, Flora, Messaoudi, Ilhem, Marzi, Andrea, Feldmann, Heinz, Katze, Michael G.
Veröffentlicht in Clin Vaccine Immunol (2015)

Regional astrocyte IFN signaling restricts pathogenesis during neurotropic viral infection

von Daniels, Brian P., Jujjavarapu, Harsha, Durrant, Douglas M., Williams, Jessica L., Green, Richard R., White, James P., Lazear, Helen M., Gale, Michael, Diamond, Michael S., Klein, Robyn S.
Veröffentlicht in J Clin Invest (2017)

Assessment and improvement of Indian‐origin rhesus macaque and Mauritian‐origin cynomolgus macaque genome annotations using deep transcriptome sequencing data

von Peng, Xinxia, Pipes, Lenore, Xiong, Hao, Green, Richard R., Jones, Daniel C., Ruzzo, Walter L., Schroth, Gary P., Mason, Christopher E., Palermo, Robert E., Katze, Michael G.
Veröffentlicht 2014

Deep Sequencing of HIV-Infected Cells: Insights into Nascent Transcription and Host-Directed Therapy

von Peng, Xinxia, Sova, Pavel, Green, Richard R., Thomas, Matthew J., Korth, Marcus J., Proll, Sean, Xu, Jiabao, Cheng, Yanbing, Yi, Kang, Chen, Li, Peng, Zhiyu, Wang, Jun, Palermo, Robert E., Katze, Michael G.
Veröffentlicht 2014

Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

von Swanson, Elliott, Lord, Cara, Reading, Julian, Heubeck, Alexander T, Genge, Palak C, Thomson, Zachary, Weiss, Morgan DA, Li, Xiao-jun, Savage, Adam K, Green, Richard R, Torgerson, Troy R, Bumol, Thomas F, Graybuck, Lucas T, Skene, Peter J
Veröffentlicht in eLife (2021)

Evidence of Cardiac Involvement in the Fetal Inflammatory Response Syndrome: Disruption of Gene Networks Programming Cardiac Development in Nonhuman Primates

von MITCHELL, Timothy, MACDONALD, James W., SRINOUANPRANCHANH, Sengkeo, BAMMLER, Theodor K., MERILLAT, Sean, BOLDENOW, Erica, COLEMAN, Michelle, Agnew, Kathy, BALDESSARI, Audrey, STENCEL-BAERENWALD, Jennifer E., TISONCIK-GO, Jennifer, GREEN, Richard R., GALE, Michael J., RAJAGOPAL, Lakshmi, ADAMS WALDORF, Kristina M.
Veröffentlicht in Am J Obstet Gynecol (2018)

Annotation of long non-coding RNAs expressed in Collaborative Cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts

von Josset, Laurence, Tchitchek, Nicolas, Gralinski, Lisa E, Ferris, Martin T, Eisfeld, Amie J, Green, Richard R, Thomas, Matthew J, Tisoncik-Go, Jennifer, Schroth, Gary P, Kawaoka, Yoshihiro, Pardo-Manuel de Villena, Fernando, Baric, Ralph S, Heise, Mark T, Peng, Xinxia, Katze, Michael G
Veröffentlicht 2014

Deep Transcriptional Sequencing of Mucosal Challenge Compartment from Rhesus Macaques Acutely Infected with Simian Immunodeficiency Virus Implicates Loss of Cell Adhesion Preceding...

von Barrenas, Fredrik, Palermo, Robert E., Agricola, Brian, Agy, Michael B., Aicher, Lauri, Carter, Victoria, Flanary, Leon, Green, Richard R., McLain, Randy, Li, Qingsheng, Lu, Wuxun, Murnane, Robert, Peng, Xinxia, Thomas, Matthew J., Weiss, Jeffrey M., Anderson, David M., Katze, Michael G.
Veröffentlicht 2014

Liver macrophage-associated inflammation correlates with SIV burden and is substantially reduced following cART

von Fisher, Bridget S., Green, Richard R., Brown, Rachel R., Wood, Matthew P., Hensley-McBain, Tiffany, Fisher, Cole, Chang, Jean, Miller, Andrew D., Bosche, William J., Lifson, Jeffrey D., Mavigner, Maud, Miller, Charlene J., Gale, Michael, Silvestri, Guido, Chahroudi, Ann, Klatt, Nichole R., Sodora, Donald L.
Veröffentlicht in PLoS Pathog (2018)

Macrophage-associated wound healing contributes to African green monkey SIV pathogenesis control

von Barrenas, Fredrik, Raehtz, Kevin, Xu, Cuiling, Law, Lynn, Green, Richard R., Silvestri, Guido, Bosinger, Steven E., Nishida, Andrew, Li, Qingsheng, Lu, Wuxun, Zhang, Jianshui, Thomas, Matthew J., Chang, Jean, Smith, Elise, Weiss, Jeffrey M., Dawoud, Reem A., Richter, George H., Trichel, Anita, Ma, Dongzhu, Peng, Xinxia, Komorowski, Jan, Apetrei, Cristian, Pandrea, Ivona, Gale, Michael
Veröffentlicht in Nat Commun (2019)

Author Correction: Macrophage-associated wound healing contributes to African green monkey SIV pathogenesis control

von Barrenas, Fredrik, Raehtz, Kevin, Xu, Cuiling, Law, Lynn, Green, Richard R., Silvestri, Guido, Bosinger, Steven E., Nishida, Andrew, Li, Qingsheng, Lu, Wuxun, Zhang, Jianshui, Thomas, Matthew J., Chang, Jean, Smith, Elise, Weiss, Jeffrey M., Dawoud, Reem A., Richter, George H., Trichel, Anita, Ma, Dongzhu, Peng, Xinxia, Komorowski, Jan, Apetrei, Cristian, Pandrea, Ivona, Gale, Michael
Veröffentlicht in Nat Commun (2019)

Integrated omics analysis of pathogenic host responses during pandemic H1N1 influenza virus infection: the crucial role of lipid metabolism

von Tisoncik-Go, Jennifer, Gasper, David J., Kyle, Jennifer E., Eisfeld, Amie J., Selinger, Christian, Hatta, Masato, Morrison, Juliet, Korth, Marcus J., Zink, Erika M., Kim, Young-Mo, Schepmoes, Athena A., Nicora, Carrie D., Purvine, Samuel O., Weitz, Karl K., Peng, Xinxia, Green, Richard R., Tilton, Susan C., Webb-Robertson, Bobbie-Jo, Waters, Katrina M., Metz, Thomas O., Smith, Richard D., Kawaoka, Yoshihiro, Suresh, M., Josset, Laurence, Katze, Michael G.
Veröffentlicht in Cell Host Microbe (2016)

Interleukin-15 response signature predicts RhCMV/SIV vaccine efficacy

von Barrenäs, Fredrik, Hansen, Scott G., Law, Lynn, Driscoll, Connor, Green, Richard R., Smith, Elise, Chang, Jean, Golez, Inah, Urion, Taryn, Peng, Xinxia, Whitmore, Leanne, Newhouse, Daniel, Hughes, Colette M., Morrow, David, Randall, Kurt T., Selseth, Andrea N., Ford, Julia C., Gilbride, Roxanne M., Randall, Bryan E., Ainslie, Emily, Oswald, Kelli, Shoemaker, Rebecca, Fast, Randy, Bosche, William J., Axthelm, Michael K., Fukazawa, Yoshinori, Pavlakis, George N., Felber, Barbara K., Fourati, Slim, Sekaly, Rafick-Pierre, Lifson, Jeffrey D., Komorowski, Jan, Kosmider, Ewelina, Shao, Danica, Song, Wenjun, Edlefsen, Paul T., Picker, Louis J., Gale, Michael
Veröffentlicht in PLoS Pathog (2021)

A comprehensive collection of systems biology data characterizing the host response to viral infection

von Aevermann, Brian D., Pickett, Brett E., Kumar, Sanjeev, Klem, Edward B., Agnihothram, Sudhakar, Askovich, Peter S., Bankhead, Armand, Bolles, Meagen, Carter, Victoria, Chang, Jean, Clauss, Therese R.W., Dash, Pradyot, Diercks, Alan H., Eisfeld, Amie J., Ellis, Amy, Fan, Shufang, Ferris, Martin T., Gralinski, Lisa E., Green, Richard R., Gritsenko, Marina A., Hatta, Masato, Heegel, Robert A., Jacobs, Jon M., Jeng, Sophia, Josset, Laurence, Kaiser, Shari M., Kelly, Sara, Law, G. Lynn, Li, Chengjun, Li, Jiangning, Long, Casey, Luna, Maria L., Matzke, Melissa, McDermott, Jason, Menachery, Vineet, Metz, Thomas O., Mitchell, Hugh, Monroe, Matthew E., Navarro, Garnet, Neumann, Gabriele, Podyminogin, Rebecca L., Purvine, Samuel O., Rosenberger, Carrie M., Sanders, Catherine J., Schepmoes, Athena A., Shukla, Anil K., Sims, Amy, Sova, Pavel, Tam, Vincent C., Tchitchek, Nicolas, Thomas, Paul G., Tilton, Susan C., Totura, Allison, Wang, Jing, Webb-Robertson, Bobbie-Jo, Wen, Ji, Weiss, Jeffrey M., Yang, Feng, Yount, Boyd, Zhang, Qibin, McWeeney, Shannon, Smith, Richard D., Waters, Katrina M., Kawaoka, Yoshihiro, Baric, Ralph, Aderem, Alan, Katze, Michael G., Scheuermann, Richard H.
Veröffentlicht in Sci Data (2014)