The projection score - an evaluation criterion for variable subset selection in PCA visualization

Por Fontes, Magnus, Soneson, Charlotte
Publicado em 2011

SMSSVD: SubMatrix Selection Singular Value Decomposition

Por Henningsson, Rasmus, Fontes, Magnus
Publicado no Bioinformatics (2019)

BayesFlow: latent modeling of flow cytometry cell populations

Por Johnsson, Kerstin, Wallin, Jonas, Fontes, Magnus
Publicado no BMC Bioinformatics (2016)

Erratum to: BayesFlow: latent modeling of flow cytometry cell populations

Por Johnsson, Kerstin, Wallin, Jonas, Fontes, Magnus
Publicado no BMC Bioinformatics (2016)

Integrative analysis of gene expression and copy number alterations using canonical correlation analysis

Por Soneson, Charlotte, Lilljebjörn, Henrik, Fioretos, Thoas, Fontes, Magnus
Publicado em 2010

Early changes in the hypothalamic region in prodromal Huntington disease revealed by MRI analysis

Por Soneson, Charlotte, Fontes, Magnus, Zhou, Yongxia, Denisov, Vladimir, Paulsen, Jane S., Kirik, Deniz, Petersén, Åsa
Publicado em 2010

Deconvolution of the Response to Bacillus Calmette–Guérin Reveals NF-κB-Induced Cytokines As Autocrine Mediators of Innate Immunity

Por Bisiaux, Aurélie, Boussier, Jeremy, Duffy, Darragh, Quintana-Murci, Lluis, Fontes, Magnus, Albert, Matthew L.
Publicado no Front Immunol (2017)

European success stories in industrial mathematics

Por Lery, Thibaut., Primicerio, Mario., Esteban, Maria J., Fontes, Magnus., Maday, Yvon., Mehrmann, Volker., Quadros, Gonçalo., Schilders, Wil., Schuppert, Andreas., Tewkesbury, Heather.
Publicado em 2011

Sex differences in IL-17 contribute to chronicity in male versus female urinary tract infection

Por Scharff, Anna Zychlinsky, Rousseau, Matthieu, Mariano, Livia Lacerda, Canton, Tracy, Consiglio, Camila Rosat, Albert, Matthew L., Fontes, Magnus, Duffy, Darragh, Ingersoll, Molly A.
Publicado no JCI Insight (2019)

The correlation pattern of acquired copy number changes in 164 ETV6/RUNX1-positive childhood acute lymphoblastic leukemias

Por Lilljebjörn, Henrik, Soneson, Charlotte, Andersson, Anna, Heldrup, Jesper, Behrendtz, Mikael, Kawamata, Norihiko, Ogawa, Seishi, Koeffler, H. Phillip, Mitelman, Felix, Johansson, Bertil, Fontes, Magnus, Fioretos, Thoas
Publicado em 2010

Increasing Clinical Severity during a Dengue Virus Type 3 Cuban Epidemic: Deep Sequencing of Evolving Viral Populations

Por Rodriguez-Roche, Rosmari, Blanc, Hervé, Bordería, Antonio V., Díaz, Gisell, Henningsson, Rasmus, Gonzalez, Daniel, Santana, Emidalys, Alvarez, Mayling, Castro, Osvaldo, Fontes, Magnus, Vignuzzi, Marco, Guzman, Maria G.
Publicado no J Virol (2016)

Group Selection and Contribution of Minority Variants during Virus Adaptation Determines Virus Fitness and Phenotype

Por Bordería, Antonio V., Isakov, Ofer, Moratorio, Gonzalo, Henningsson, Rasmus, Agüera-González, Sonia, Organtini, Lindsey, Gnädig, Nina F., Blanc, Hervé, Alcover, Andrés, Hafenstein, Susan, Fontes, Magnus, Shomron, Noam, Vignuzzi, Marco
Publicado no PLoS Pathog (2015)

Attenuation of RNA viruses by redirecting their evolution in sequence space

Por Moratorio, Gonzalo, Henningsson, Rasmus, Barbezange, Cyril, Carrau, Lucia, Bordería, Antonio V., Blanc, Hervé, Beaucourt, Stephanie, Poirier, Enzo Z., Vallet, Thomas, Boussier, Jeremy, Mounce, Bryan C., Fontes, Magnus, Vignuzzi, Marco
Publicado no Nat Microbiol (2017)

Molecular signatures in childhood acute leukemia and their correlations to expression patterns in normal hematopoietic subpopulations

Por Andersson, Anna, Olofsson, Tor, Lindgren, David, Nilsson, Björn, Ritz, Cecilia, Edén, Patrik, Lassen, Carin, Råde, Johan, Fontes, Magnus, Mörse, Helena, Heldrup, Jesper, Behrendtz, Mikael, Mitelman, Felix, Höglund, Mattias, Johansson, Bertil, Fioretos, Thoas
Publicado em 2005

Whole-Genome Sequencing Analysis from the Chikungunya Virus Caribbean Outbreak Reveals Novel Evolutionary Genomic Elements

Por Stapleford, Kenneth A., Moratorio, Gonzalo, Henningsson, Rasmus, Chen, Rubing, Matheus, Séverine, Enfissi, Antoine, Weissglas-Volkov, Daphna, Isakov, Ofer, Blanc, Hervé, Mounce, Bryan C., Dupont-Rouzeyrol, Myrielle, Shomron, Noam, Weaver, Scott, Fontes, Magnus, Rousset, Dominique, Vignuzzi, Marco
Publicado no PLoS Negl Trop Dis (2016)

Polygenic risk for skin autoimmunity impacts immune checkpoint blockade in bladder cancer

Por Khan, Zia, Di Nucci, Flavia, Kwan, Antonia, Hammer, Christian, Mariathasan, Sanjeev, Rouilly, Vincent, Carroll, Jonathan, Fontes, Magnus, Ley Acosta, Sergio, Guardino, Ellie, Chen-Harris, Haiyin, Bhangale, Tushar, Mellman, Ira, Rosenberg, Jonathan, Powles, Thomas, Hunkapiller, Julie, Chandler, G. Scott, Albert, Matthew L.
Publicado no Proc Natl Acad Sci U S A (2020)

Identification of ETV6-RUNX1-like and DUX4-rearranged subtypes in paediatric B-cell precursor acute lymphoblastic leukaemia

Por Lilljebjörn, Henrik, Henningsson, Rasmus, Hyrenius-Wittsten, Axel, Olsson, Linda, Orsmark-Pietras, Christina, von Palffy, Sofia, Askmyr, Maria, Rissler, Marianne, Schrappe, Martin, Cario, Gunnar, Castor, Anders, Pronk, Cornelis J. H., Behrendtz, Mikael, Mitelman, Felix, Johansson, Bertil, Paulsson, Kajsa, Andersson, Anna K., Fontes, Magnus, Fioretos, Thoas
Publicado no Nat Commun (2016)

Machine learning can identify newly diagnosed patients with CLL at high risk of infection

Por Agius, Rudi, Brieghel, Christian, Andersen, Michael A., Pearson, Alexander T., Ledergerber, Bruno, Cozzi-Lepri, Alessandro, Louzoun, Yoram, Andersen, Christen L., Bergstedt, Jacob, von Stemann, Jakob H., Jørgensen, Mette, Tang, Man-Hung Eric, Fontes, Magnus, Bahlo, Jasmin, Herling, Carmen D., Hallek, Michael, Lundgren, Jens, MacPherson, Cameron Ross, Larsen, Jan, Niemann, Carsten U.
Publicado no Nat Commun (2020)