Meiotic deletion at the BUF1 locus of the fungus Magnaporthe grisea is controlled by interaction with the homologous chromosome.

Por Farman, Mark L
Publicado em 2002

Systematic overrepresentation of DNA termini and underrepresentation of subterminal regions among sequencing templates prepared from hydrodynamically sheared linear DNA molecules

Por Schwartz, Sherri L, Farman, Mark L
Publicado em 2010

Two complete mitochondrial genomes from Praticolella mexicana Perez, 2011 (Polygyridae) and gene order evolution in Helicoidea (Mollusca, Gastropoda)

Por Minton, Russell L., Cruz, Marco A. Martinez, Farman, Mark L., Perez, Kathryn E.
Publicado no Zookeys (2016)

Telomere-Targeted Retrotransposons in the Rice Blast Fungus Magnaporthe oryzae: Agents of Telomere Instability

Por Starnes, John H., Thornbury, David W., Novikova, Olga S., Rehmeyer, Cathryn J., Farman, Mark L.
Publicado em 2012

An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis

Por Farman, Mark, Calie, Patrick, Jaromczyk, Jerzy, Jaromczyk, Jolanta, Moore, Neil, Harris, Daniel, Schardl, Chris
Publicado em 2014

Chromosome-End Knockoff Strategy to Reshape Alkaloid Profiles of a Fungal Endophyte

Por Florea, Simona, Phillips, Timothy D., Panaccione, Daniel G., Farman, Mark L., Schardl, Christopher L.
Publicado no G3 (Bethesda) (2016)

Genome sequence variation in the constricta strain dramatically alters the protein interaction and localization map of Potato yellow dwarf virus

Por Jang, Chanyong, Wang, Renyuan, Wells, Joseph, Leon, Fabian, Farman, Mark, Hammond, John, Goodin, Michael M.
Publicado no J Gen Virol (2017)

Organization of chromosome ends in the rice blast fungus, Magnaporthe oryzae

Por Rehmeyer, Cathryn, Li, Weixi, Kusaba, Motoaki, Kim, Yun-Sik, Brown, Doug, Staben, Chuck, Dean, Ralph, Farman, Mark
Publicado em 2006

Using HPC for teaching and learning bioinformatics software: Benefits and challenges

Por Parke, Tyler, Farman, Mark, Farnsworth, Elizabeth, Fox, Derek, Jaromczyk, Jerzy W, Jaromczyk, Jolanta, Moore, Neil, Schardl, Christopher L, Yoshida, Ruriko, Calie, Pat
Publicado em 2013

Characterization of Chromosome Ends in the Filamentous Fungus Neurospora crassa

Por Wu, Cheng, Kim, Yun-Sik, Smith, Kristina M., Li, Weixi, Hood, Heather M., Staben, Chuck, Selker, Eric U., Sachs, Matthew S., Farman, Mark L.
Publicado em 2009

Structure and Specificity of a Permissive Bacterial C-Prenyltransferase

Por Elshahawi, Sherif I., Cao, Hongnan, Shaaban, Khaled A., Ponomareva, Larissa V., Subramanian, Thangaiah, Farman, Mark L., Spielmann, H. Peter, Phillips, George N., Thorson, Jon S., Singh, Shanteri
Publicado no Nat Chem Biol (2017)

Currencies of Mutualisms: Sources of Alkaloid Genes in Vertically Transmitted Epichloae

Por Schardl, Christopher L., Young, Carolyn A., Pan, Juan, Florea, Simona, Takach, Johanna E., Panaccione, Daniel G., Farman, Mark L., Webb, Jennifer S., Jaromczyk, Jolanta, Charlton, Nikki D., Nagabhyru, Padmaja, Chen, Li, Shi, Chong, Leuchtmann, Adrian
Publicado em 2013

'PACLIMS': A component LIM system for high-throughput functional genomic analysis

Por Farman Mark, Patel Gayatri, Orbach Marc J, Tucker Sara, Galadima Natalia, Mitchell Thomas, Floyd Anna, Nolin Shelly, Windham Donald, Diener Stephen, Brown Douglas, Rajagopalon Ravi, Donofrio Nicole, Pampanwar Vishal, Soderlund Cari, Lee Yong-Hwan, Dean Ralph A
Publicado em 2005-04-01

'PACLIMS': A component LIM system for high-throughput functional genomic analysis

Por Donofrio, Nicole, Rajagopalon, Ravi, Brown, Douglas, Diener, Stephen, Windham, Donald, Nolin, Shelly, Floyd, Anna, Mitchell, Thomas, Galadima, Natalia, Tucker, Sara, Orbach, Marc J, Patel, Gayatri, Farman, Mark, Pampanwar, Vishal, Soderlund, Cari, Lee, Yong-Hwan, Dean, Ralph A
Publicado em 2005

Gene Flow between Divergent Cereal- and Grass-Specific Lineages of the Rice Blast Fungus Magnaporthe oryzae

Por Gladieux, Pierre, Condon, Bradford, Ravel, Sebastien, Soanes, Darren, Maciel, Joao Leodato Nunes, Nhani, Antonio, Chen, Li, Terauchi, Ryohei, Lebrun, Marc-Henri, Tharreau, Didier, Mitchell, Thomas, Pedley, Kerry F., Valent, Barbara, Talbot, Nicholas J., Farman, Mark, Fournier, Elisabeth
Publicado no mBio (2018)

Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi

Por Okagaki, Laura H., Nunes, Cristiano C., Sailsbery, Joshua, Clay, Brent, Brown, Doug, John, Titus, Oh, Yeonyee, Young, Nelson, Fitzgerald, Michael, Haas, Brian J., Zeng, Qiandong, Young, Sarah, Adiconis, Xian, Fan, Lin, Levin, Joshua Z., Mitchell, Thomas K., Okubara, Patricia A., Farman, Mark L., Kohn, Linda M., Birren, Bruce, Ma, Li-Jun, Dean, Ralph A.
Publicado no G3 (Bethesda) (2015)

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017

Por Rouchka, Eric C., Chariker, Julia H., Tieri, David A., Park, Juw Won, Rajurkar, Shreedharkumar, Singh, Vikas, Verma, Nishchal K., Cui, Yan, Farman, Mark, Condon, Bradford, Moore, Neil, Jaromczyk, Jerzy, Jaromczyk, Jolanta, Harris, Daniel, Calie, Patrick, Shin, Eun Kyong, Davis, Robert L., Shaban-Nejad, Arash, Mitchell, Joshua M., Flight, Robert M., Wang, Qing Jun, Higashi, Richard M., Fan, Teresa W-M, Lane, Andrew N., Moseley, Hunter N. B., Lu, Liangqun, Daigle, Bernie J, Chen, Xi, Smelter, Andrey, Moseley, Hunter N. B., Jaromczyk, Jerzy W., Farman, Mark, Chen, Li, Moore, Neil, Phan, Bailey K., Serpico, Nathaniel J., Toney, Ethan G., Melton, Caroline E., Mandel, Jennifer R., Daigle, Bernie J., Chen, Hao, Zaman, Kazi I., Homayouni, Ramin, Trainor, Patrick J., Carlisle, Samantha M., DeFilippis, Andrew P., Rai, Shesh N.
Publicado no BMC Bioinformatics (2017)

The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion

Por Coleman, Jeffrey J., Rounsley, Steve D., Rodriguez-Carres, Marianela, Kuo, Alan, Wasmann, Catherine C., Grimwood, Jane, Schmutz, Jeremy, Taga, Masatoki, White, Gerard J., Zhou, Shiguo, Schwartz, David C., Freitag, Michael, Ma, Li-jun, Danchin, Etienne G. J., Henrissat, Bernard, Coutinho, Pedro M., Nelson, David R., Straney, Dave, Napoli, Carolyn A., Barker, Bridget M., Gribskov, Michael, Rep, Martijn, Kroken, Scott, Molnár, István, Rensing, Christopher, Kennell, John C., Zamora, Jorge, Farman, Mark L., Selker, Eric U., Salamov, Asaf, Shapiro, Harris, Pangilinan, Jasmyn, Lindquist, Erika, Lamers, Casey, Grigoriev, Igor V., Geiser, David M., Covert, Sarah F., Temporini, Esteban, VanEtten, Hans D.
Publicado em 2009

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

Por Stajich, Jason E., Wilke, Sarah K., Ahrén, Dag, Au, Chun Hang, Birren, Bruce W., Borodovsky, Mark, Burns, Claire, Canbäck, Björn, Casselton, Lorna A., Cheng, C.K., Deng, Jixin, Dietrich, Fred S., Fargo, David C., Farman, Mark L., Gathman, Allen C., Goldberg, Jonathan, Guigó, Roderic, Hoegger, Patrick J., Hooker, James B., Huggins, Ashleigh, James, Timothy Y., Kamada, Takashi, Kilaru, Sreedhar, Kodira, Chinnapa, Kües, Ursula, Kupfer, Doris, Kwan, H.S., Lomsadze, Alexandre, Li, Weixi, Lilly, Walt W., Ma, Li-Jun, Mackey, Aaron J., Manning, Gerard, Martin, Francis, Muraguchi, Hajime, Natvig, Donald O., Palmerini, Heather, Ramesh, Marilee A., Rehmeyer, Cathy J., Roe, Bruce A., Shenoy, Narmada, Stanke, Mario, Ter-Hovhannisyan, Vardges, Tunlid, Anders, Velagapudi, Rajesh, Vision, Todd J., Zeng, Qiandong, Zolan, Miriam E., Pukkila, Patricia J.
Publicado em 2010

Plant-Symbiotic Fungi as Chemical Engineers: Multi-Genome Analysis of the Clavicipitaceae Reveals Dynamics of Alkaloid Loci

Por Schardl, Christopher L., Young, Carolyn A., Hesse, Uljana, Amyotte, Stefan G., Andreeva, Kalina, Calie, Patrick J., Fleetwood, Damien J., Haws, David C., Moore, Neil, Oeser, Birgitt, Panaccione, Daniel G., Schweri, Kathryn K., Voisey, Christine R., Farman, Mark L., Jaromczyk, Jerzy W., Roe, Bruce A., O'Sullivan, Donal M., Scott, Barry, Tudzynski, Paul, An, Zhiqiang, Arnaoudova, Elissaveta G., Bullock, Charles T., Charlton, Nikki D., Chen, Li, Cox, Murray, Dinkins, Randy D., Florea, Simona, Glenn, Anthony E., Gordon, Anna, Güldener, Ulrich, Harris, Daniel R., Hollin, Walter, Jaromczyk, Jolanta, Johnson, Richard D., Khan, Anar K., Leistner, Eckhard, Leuchtmann, Adrian, Li, Chunjie, Liu, JinGe, Liu, Jinze, Liu, Miao, Mace, Wade, Machado, Caroline, Nagabhyru, Padmaja, Pan, Juan, Schmid, Jan, Sugawara, Koya, Steiner, Ulrike, Takach, Johanna E., Tanaka, Eiji, Webb, Jennifer S., Wilson, Ella V., Wiseman, Jennifer L., Yoshida, Ruriko, Zeng, Zheng
Publicado em 2013