MSCTrees: a mean-shift based toolkit for cluster analysis of phylogenetic trees

od Li, Weixi, Jaromczyk, Jerzy W
Wydane 2011

Experimenting with database segmentation size vs time performance for mpiBLAST on an IBM HS21 blade cluster

od Harris, Daniel, Jaromczyk, Jerzy W, Schardl, Christopher L
Wydane 2010

MedSurv: a software application for creating, conducting and managing medical surveys and questionnaires

od Ware, Zachary S, Selby, Lisbeth A, Jaromczyk, Jerzy W
Wydane 2008

Finding long protein products of alternatively spliced genes

od Moore, Neil, Jaromczyk, Jerzy W, Schardl, Christopher L
Wydane 2012

FPD2GB2: Automating a transition from a customized genome browser to GBrowse2

od Chui, Roger, Jaromczyk, Jerzy W, Moore, Neil, Schardl, Christopher L
Wydane 2013

Validation and quality assurance for genome browser database exports

od Chui, Roger, Jaromczyk, Jerzy W, Moore, Neil, Schardl, Christopher L
Wydane w BMC Bioinformatics (2015)

Rapid and Reusable Text Visualization and Exploration Development with DELVE

od Harris, Daniel R., Kavuluru, Ramakanth, Jaromczyk, Jerzy W., Johnson, Todd R.
Wydane w AMIA Jt Summits Transl Sci Proc (2017)

Phylotree – a toolkit for computing experiments with distance-based methods for genome coevolution

od Arnaoudova, Elissaveta, Jaromczyk, Jerzy W, Moore, Neil, Schardl, Christopher L, Yoshida, Ruriko
Wydane 2010

Automating deployment of several GBrowse instances

od Moore, Neil, Jaromczyk, Jerzy W, Schardl, Christopher L, Hill, Joedocei, Wright, Devin
Wydane 2014

Statistical Phylogenetic Tree Analysis Using Differences of Means

od Arnaoudova, Elissaveta, Haws, David C., Huggins, Peter, Jaromczyk, Jerzy W., Moore, Neil, Schardl, Christopher L., Yoshida, Ruriko
Wydane 2010

Using HPC for teaching and learning bioinformatics software: Benefits and challenges

od Parke, Tyler, Farman, Mark, Farnsworth, Elizabeth, Fox, Derek, Jaromczyk, Jerzy W, Jaromczyk, Jolanta, Moore, Neil, Schardl, Christopher L, Yoshida, Ruriko, Calie, Pat
Wydane 2013

Visualizing and sharing results in bioinformatics projects: GBrowse and GenBank exports

od Arnaoudova, Elissaveta G, Bowens, Philip J, Chui, Roger G, Dinkins, Randy D, Hesse, Uljana, Jaromczyk, Jerzy W, Martin, Mitchell, Maynard, Paul, Moore, Neil, Schardl, Chris L
Wydane 2009

Swainsonine Biosynthesis Genes in Diverse Symbiotic and Pathogenic Fungi

od Cook, Daniel, Donzelli, Bruno G. G., Creamer, Rebecca, Baucom, Deana L., Gardner, Dale R., Pan, Juan, Moore, Neil, Krasnoff, Stuart B., Jaromczyk, Jerzy W., Schardl, Christopher L.
Wydane w G3 (Bethesda) (2017)

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017

od Rouchka, Eric C., Chariker, Julia H., Tieri, David A., Park, Juw Won, Rajurkar, Shreedharkumar, Singh, Vikas, Verma, Nishchal K., Cui, Yan, Farman, Mark, Condon, Bradford, Moore, Neil, Jaromczyk, Jerzy, Jaromczyk, Jolanta, Harris, Daniel, Calie, Patrick, Shin, Eun Kyong, Davis, Robert L., Shaban-Nejad, Arash, Mitchell, Joshua M., Flight, Robert M., Wang, Qing Jun, Higashi, Richard M., Fan, Teresa W-M, Lane, Andrew N., Moseley, Hunter N. B., Lu, Liangqun, Daigle, Bernie J, Chen, Xi, Smelter, Andrey, Moseley, Hunter N. B., Jaromczyk, Jerzy W., Farman, Mark, Chen, Li, Moore, Neil, Phan, Bailey K., Serpico, Nathaniel J., Toney, Ethan G., Melton, Caroline E., Mandel, Jennifer R., Daigle, Bernie J., Chen, Hao, Zaman, Kazi I., Homayouni, Ramin, Trainor, Patrick J., Carlisle, Samantha M., DeFilippis, Andrew P., Rai, Shesh N.
Wydane w BMC Bioinformatics (2017)

Plant-Symbiotic Fungi as Chemical Engineers: Multi-Genome Analysis of the Clavicipitaceae Reveals Dynamics of Alkaloid Loci

od Schardl, Christopher L., Young, Carolyn A., Hesse, Uljana, Amyotte, Stefan G., Andreeva, Kalina, Calie, Patrick J., Fleetwood, Damien J., Haws, David C., Moore, Neil, Oeser, Birgitt, Panaccione, Daniel G., Schweri, Kathryn K., Voisey, Christine R., Farman, Mark L., Jaromczyk, Jerzy W., Roe, Bruce A., O'Sullivan, Donal M., Scott, Barry, Tudzynski, Paul, An, Zhiqiang, Arnaoudova, Elissaveta G., Bullock, Charles T., Charlton, Nikki D., Chen, Li, Cox, Murray, Dinkins, Randy D., Florea, Simona, Glenn, Anthony E., Gordon, Anna, Güldener, Ulrich, Harris, Daniel R., Hollin, Walter, Jaromczyk, Jolanta, Johnson, Richard D., Khan, Anar K., Leistner, Eckhard, Leuchtmann, Adrian, Li, Chunjie, Liu, JinGe, Liu, Jinze, Liu, Miao, Mace, Wade, Machado, Caroline, Nagabhyru, Padmaja, Pan, Juan, Schmid, Jan, Sugawara, Koya, Steiner, Ulrike, Takach, Johanna E., Tanaka, Eiji, Webb, Jennifer S., Wilson, Ella V., Wiseman, Jennifer L., Yoshida, Ruriko, Zeng, Zheng
Wydane 2013

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016

od Rouchka, Eric C., Chariker, Julia H., Harrison, Benjamin J., Park, Juw Won, Cao, Xueyuan, Pounds, Stanley, Raimondi, Susana, Downing, James, Ribeiro, Raul, Rubnitz, Jeffery, Lamba, Jatinder, Daigle, Bernie J., Burgess, Deborah, Gehrlich, Stephanie, Carmen, John C., Johnson, Nicholas, Emani, Chandrakanth, Gehrlich, Stephanie, Burgess, Deborah, Carmen, John C., De Silva, Kalpani, Heaton, Michael P., Kalbfleisch, Theodore S., Viangteeravat, Teeradache, Mudunuri, Rahul, Ajayi, Oluwaseun, Şen, Fatih, Huang, Eunice Y., Mohebbi, Mohammad, Florian, Luaire, Jackson, Douglas J., Naber, John F., Sabbir, AKM, Ellingson, Sally R., Lu, Yuping, Phillips, Charles A, Langston, Michael A., Sevakula, Rahul K., Thirukovalluru, Raghuveer, Verma, Nishchal K., Cui, Yan, Sayed, Mohammed, Park, Juw Won, Wang, Jing, Liu, Qi, Shyr, Yu, Zhang, Xiaofei, Ellingson, Sally R., Prodduturi, Naresh, Oliver, Gavin R., Grill, Diane, Na, Jie, Eckel-Passow, Jeanette, Klee, Eric W., Goodin, Michael M., Farman, Mark, Inocencio, Harrison, Jang, Chanyong, Jaromczyk, Jerzy W., Moore, Neil, Sovacool, Kelly, Dent, Leon, Izban, Mike, Mandape, Sammed, Sakhare, Shruti, Pratap, Siddharth, Marshall, Dana, DePriest, M Scotty, MacLeod, James N., Kalbfleisch, Theodore S., Emani, Chandrakanth, Adam, Hanady, Blandford, Ethan, Campbell, Joel, Castlen, Joshua, Dixon, Brittany, Gilbert, Ginger, Hall, Aaron, Kreisle, Philip, Lasher, Jessica, Oakes, Bethany, Speer, Allison, Valentine, Maximilian, Nagisetty, Naga Satya V. Rao, Jose, Rony, Viangteeravat, Teeradache, Rooney, Robert, Hains, David
Wydane w BMC Bioinformatics (2016)