M-BISON: Microarray-based integration of data sources using networks

Por Daigle, Bernie J, Altman, Russ B
Publicado em 2008

SParSE++: improved event-based stochastic parameter search

Por Roh, Min K., Daigle, Bernie J.
Publicado no BMC Syst Biol (2016)

Inferring single-cell gene expression mechanisms using stochastic simulation

Por Daigle, Bernie J., Soltani, Mohammad, Petzold, Linda R., Singh, Abhyudai
Publicado no Bioinformatics (2015)

Automated estimation of rare event probabilities in biochemical systems

Por Daigle, Bernie J., Roh, Min K., Gillespie, Dan T., Petzold, Linda R.
Publicado em 2011

State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events

Por Roh, Min K., Daigle, Bernie J., Gillespie, Dan T., Petzold, Linda R.
Publicado em 2011

Core module biomarker identification with network exploration for breast cancer metastasis

Por Yang, Ruoting, Daigle, Bernie J, Petzold, Linda R, Doyle, Francis J
Publicado em 2012

Accelerated maximum likelihood parameter estimation for stochastic biochemical systems

Por Daigle, Bernie J, Roh, Min K, Petzold, Linda R, Niemi, Jarad
Publicado em 2012

Independent component analysis: mining microarray data for fundamental human gene expression modules

Por Engreitz, Jesse M., Daigle, Bernie J., Marshall, Jonathan J., Altman, Russ B.
Publicado em 2010

Identification of disease states associated with coagulopathy in trauma

Por Zhang, Yuanyang, Wu, Tie Bo, Daigle, Bernie J., Cohen, Mitchell, Petzold, Linda
Publicado no BMC Med Inform Decis Mak (2016)

Using Pre-existing Microarray Datasets to Increase Experimental Power: Application to Insulin Resistance

Por Daigle, Bernie J., Deng, Alicia, McLaughlin, Tracey, Cushman, Samuel W., Cam, Margaret C., Reaven, Gerald, Tsao, Philip S., Altman, Russ B.
Publicado em 2010

Mice lacking the β2 adrenergic receptor have a unique genetic profile before and after focal brain ischaemia

Por White, Robin E, Palm, Curtis, Xu, Lijun, Ling, Evelyn, Ginsburg, Mitchell, Daigle, Bernie J, Han, Ruquan, Patterson, Andrew, Altman, Russ B, Giffard, Rona G
Publicado em 2012

Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist

Por Drawert, Brian, Hellander, Andreas, Bales, Ben, Banerjee, Debjani, Bellesia, Giovanni, Daigle, Bernie J., Douglas, Geoffrey, Gu, Mengyuan, Gupta, Anand, Hellander, Stefan, Horuk, Chris, Nath, Dibyendu, Takkar, Aviral, Wu, Sheng, Lötstedt, Per, Krintz, Chandra, Petzold, Linda R.
Publicado no PLoS Comput Biol (2016)

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017

Por Rouchka, Eric C., Chariker, Julia H., Tieri, David A., Park, Juw Won, Rajurkar, Shreedharkumar, Singh, Vikas, Verma, Nishchal K., Cui, Yan, Farman, Mark, Condon, Bradford, Moore, Neil, Jaromczyk, Jerzy, Jaromczyk, Jolanta, Harris, Daniel, Calie, Patrick, Shin, Eun Kyong, Davis, Robert L., Shaban-Nejad, Arash, Mitchell, Joshua M., Flight, Robert M., Wang, Qing Jun, Higashi, Richard M., Fan, Teresa W-M, Lane, Andrew N., Moseley, Hunter N. B., Lu, Liangqun, Daigle, Bernie J, Chen, Xi, Smelter, Andrey, Moseley, Hunter N. B., Jaromczyk, Jerzy W., Farman, Mark, Chen, Li, Moore, Neil, Phan, Bailey K., Serpico, Nathaniel J., Toney, Ethan G., Melton, Caroline E., Mandel, Jennifer R., Daigle, Bernie J., Chen, Hao, Zaman, Kazi I., Homayouni, Ramin, Trainor, Patrick J., Carlisle, Samantha M., DeFilippis, Andrew P., Rai, Shesh N.
Publicado no BMC Bioinformatics (2017)

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016

Por Rouchka, Eric C., Chariker, Julia H., Harrison, Benjamin J., Park, Juw Won, Cao, Xueyuan, Pounds, Stanley, Raimondi, Susana, Downing, James, Ribeiro, Raul, Rubnitz, Jeffery, Lamba, Jatinder, Daigle, Bernie J., Burgess, Deborah, Gehrlich, Stephanie, Carmen, John C., Johnson, Nicholas, Emani, Chandrakanth, Gehrlich, Stephanie, Burgess, Deborah, Carmen, John C., De Silva, Kalpani, Heaton, Michael P., Kalbfleisch, Theodore S., Viangteeravat, Teeradache, Mudunuri, Rahul, Ajayi, Oluwaseun, Şen, Fatih, Huang, Eunice Y., Mohebbi, Mohammad, Florian, Luaire, Jackson, Douglas J., Naber, John F., Sabbir, AKM, Ellingson, Sally R., Lu, Yuping, Phillips, Charles A, Langston, Michael A., Sevakula, Rahul K., Thirukovalluru, Raghuveer, Verma, Nishchal K., Cui, Yan, Sayed, Mohammed, Park, Juw Won, Wang, Jing, Liu, Qi, Shyr, Yu, Zhang, Xiaofei, Ellingson, Sally R., Prodduturi, Naresh, Oliver, Gavin R., Grill, Diane, Na, Jie, Eckel-Passow, Jeanette, Klee, Eric W., Goodin, Michael M., Farman, Mark, Inocencio, Harrison, Jang, Chanyong, Jaromczyk, Jerzy W., Moore, Neil, Sovacool, Kelly, Dent, Leon, Izban, Mike, Mandape, Sammed, Sakhare, Shruti, Pratap, Siddharth, Marshall, Dana, DePriest, M Scotty, MacLeod, James N., Kalbfleisch, Theodore S., Emani, Chandrakanth, Adam, Hanady, Blandford, Ethan, Campbell, Joel, Castlen, Joshua, Dixon, Brittany, Gilbert, Ginger, Hall, Aaron, Kreisle, Philip, Lasher, Jessica, Oakes, Bethany, Speer, Allison, Valentine, Maximilian, Nagisetty, Naga Satya V. Rao, Jose, Rony, Viangteeravat, Teeradache, Rooney, Robert, Hains, David
Publicado no BMC Bioinformatics (2016)