Accurate Measurement of the Effects of All Amino-Acid Mutations on Influenza Hemagglutinin

le Doud, Michael B., Bloom, Jesse D.
Foilsithe in Viruses (2016)

Site-Specific Amino Acid Preferences Are Mostly Conserved in Two Closely Related Protein Homologs

le Doud, Michael B., Ashenberg, Orr, Bloom, Jesse D.
Foilsithe in Mol Biol Evol (2015)

Complete mapping of viral escape from neutralizing antibodies

le Doud, Michael B., Hensley, Scott E., Bloom, Jesse D.
Foilsithe in PLoS Pathog (2017)

phydms: software for phylogenetic analyses informed by deep mutational scanning

le Hilton, Sarah K., Doud, Michael B., Bloom, Jesse D.
Foilsithe in PeerJ (2017)

How single mutations affect viral escape from broad and narrow antibodies to H1 influenza hemagglutinin

le Doud, Michael B., Lee, Juhye M., Bloom, Jesse D.
Foilsithe in Nat Commun (2018)

Deep mutational scanning identifies sites in influenza nucleoprotein that affect viral inhibition by MxA

le Ashenberg, Orr, Padmakumar, Jai, Doud, Michael B., Bloom, Jesse D.
Foilsithe in PLoS Pathog (2017)

Unexpected fold in the circumsporozoite protein target of malaria vaccines

le Doud, Michael B., Koksal, Adem C., Mi, Li-Zhi, Song, Gaojie, Lu, Chafen, Springer, Timothy A.
Foilsithe 2012

Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants

le Lee, Juhye M., Huddleston, John, Doud, Michael B., Hooper, Kathryn A., Wu, Nicholas C., Bedford, Trevor, Bloom, Jesse D.
Foilsithe in Proc Natl Acad Sci U S A (2018)

Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin

le Phillips, Angela M, Doud, Michael B, Gonzalez, Luna O, Butty, Vincent L, Lin, Yu-Shan, Bloom, Jesse D, Shoulders, Matthew D
Foilsithe in eLife (2018)