A New Framework and Software to Estimate Time-Varying Reproduction Numbers During Epidemics

Por Cori, Anne, Ferguson, Neil M., Fraser, Christophe, Cauchemez, Simon
Publicado em 2013

Transmission parameters of the A/H1N1 (2009) influenza virus pandemic: a review

Por Boëlle, Pierre‐Yves, Ansart, Séverine, Cori, Anne, Valleron, Alain‐Jacques
Publicado no Influenza Other Respir Viruses (2011)

Estimating HIV incidence from case-report data: method and an application in Colombia

Por Vesga, Juan Fernando, Cori, Anne, van Sighem, Ard, Hallett, Timothy B.
Publicado no AIDS (2014)

Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data

Por Jombart, Thibaut, Cori, Anne, Didelot, Xavier, Cauchemez, Simon, Fraser, Christophe, Ferguson, Neil
Publicado em 2014

Impact and Cost-Effectiveness of Point-Of-Care CD4 Testing on the HIV Epidemic in South Africa

Por Heffernan, Alastair, Barber, Ella, Thomas, Ranjeeta, Fraser, Christophe, Pickles, Michael, Cori, Anne
Publicado no PLoS One (2016)

Temporal Variability and Social Heterogeneity in Disease Transmission: The Case of SARS in Hong Kong

Por Cori, Anne, Boëlle, Pierre-Yves, Thomas, Guy, Leung, Gabriel M., Valleron, Alain-Jacques
Publicado em 2009

Transmissibility and geographic spread of the 1889 influenza pandemic

Por Valleron, Alain-Jacques, Cori, Anne, Valtat, Sophie, Meurisse, Sofia, Carrat, Fabrice, Boëlle, Pierre-Yves
Publicado em 2010

CD4(+) cell dynamics in untreated HIV-1 infection: overall rates, and effects of age, viral load, sex and calendar time

Por Cori, Anne, Pickles, Michael, van Sighem, Ard, Gras, Luuk, Bezemer, Daniela, Reiss, Peter, Fraser, Christophe
Publicado no AIDS (2015)

How Can Viral Dynamics Models Inform Endpoint Measures in Clinical Trials of Therapies for Acute Viral Infections?

Por Vegvari, Carolin, Hadjichrysanthou, Christoforos, Cauët, Emilie, Lawrence, Emma, Cori, Anne, de Wolf, Frank, Anderson, Roy M.
Publicado no PLoS One (2016)

HIV Treatment-As-Prevention Research: Taking the Right Road at the Crossroads

Por Hayes, Richard, Fidler, Sarah, Cori, Anne, Fraser, Christophe, Floyd, Sian, Ayles, Helen, Beyers, Nulda, El-Sadr, Wafaa
Publicado no PLoS Med (2015)

How effectively can HIV phylogenies be used to measure heritability?

Por Shirreff, George, Alizon, Samuel, Cori, Anne, Günthard, Huldrych F., Laeyendecker, Oliver, van Sighem, Ard, Bezemer, Daniela, Fraser, Christophe
Publicado em 2013

International risk of yellow fever spread from the ongoing outbreak in Brazil, December 2016 to May 2017

Por Dorigatti, Ilaria, Hamlet, Arran, Aguas, Ricardo, Cattarino, Lorenzo, Cori, Anne, Donnelly, Christl A, Garske, Tini, Imai, Natsuko, Ferguson, Neil M
Publicado no Euro Surveill (2017)

Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks

Por Lipsitch, Marc, Donnelly, Christl A., Fraser, Christophe, Blake, Isobel M., Cori, Anne, Dorigatti, Ilaria, Ferguson, Neil M., Garske, Tini, Mills, Harriet L., Riley, Steven, Van Kerkhove, Maria D., Hernán, Miguel A.
Publicado no PLoS Negl Trop Dis (2015)

The Incidence Patterns Model to Estimate the Distribution of New HIV Infections in Sub-Saharan Africa: Development and Validation of a Mathematical Model

Por Bórquez, Annick, Cori, Anne, Pufall, Erica L., Kasule, Jingo, Slaymaker, Emma, Price, Alison, Elmes, Jocelyn, Zaba, Basia, Crampin, Amelia C., Kagaayi, Joseph, Lutalo, Tom, Urassa, Mark, Gregson, Simon, Hallett, Timothy B.
Publicado no PLoS Med (2016)

Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis

Por Bezemer, Daniela, Cori, Anne, Ratmann, Oliver, van Sighem, Ard, Hermanides, Hillegonda S., Dutilh, Bas E., Gras, Luuk, Rodrigues Faria, Nuno, van den Hengel, Rob, Duits, Ashley J., Reiss, Peter, de Wolf, Frank, Fraser, Christophe
Publicado no PLoS Med (2015)

Key data for outbreak evaluation: building on the Ebola experience

Por Cori, Anne, Donnelly, Christl A., Dorigatti, Ilaria, Ferguson, Neil M., Fraser, Christophe, Garske, Tini, Jombart, Thibaut, Nedjati-Gilani, Gemma, Nouvellet, Pierre, Riley, Steven, Van Kerkhove, Maria D., Mills, Harriet L., Blake, Isobel M.
Publicado no Philos Trans R Soc Lond B Biol Sci (2017)

HPTN 071 (PopART): A Cluster-Randomized Trial of the Population Impact of an HIV Combination Prevention Intervention Including Universal Testing and Treatment: Mathematical Model

Por Cori, Anne, Ayles, Helen, Beyers, Nulda, Schaap, Ab, Floyd, Sian, Sabapathy, Kalpana, Eaton, Jeffrey W., Hauck, Katharina, Smith, Peter, Griffith, Sam, Moore, Ayana, Donnell, Deborah, Vermund, Sten H., Fidler, Sarah, Hayes, Richard, Fraser, Christophe
Publicado em 2014

The role of rapid diagnostics in managing Ebola epidemics

Por Nouvellet, Pierre, Garske, Tini, Mills, Harriet L., Nedjati-Gilani, Gemma, Hinsley, Wes, Blake, Isobel M., Van Kerkhove, Maria D., Cori, Anne, Dorigatti, Ilaria, Jombart, Thibaut, Riley, Steven, Fraser, Christophe, Donnelly, Christl A., Ferguson, Neil M.
Publicado no Nature (2015)

Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting

Por Tong, Steven Y.C., Holden, Matthew T.G., Nickerson, Emma K., Cooper, Ben S., Köser, Claudio U., Cori, Anne, Jombart, Thibaut, Cauchemez, Simon, Fraser, Christophe, Wuthiekanun, Vanaporn, Thaipadungpanit, Janjira, Hongsuwan, Maliwan, Day, Nicholas P., Limmathurotsakul, Direk, Parkhill, Julian, Peacock, Sharon J.
Publicado no Genome Res (2015)

OutbreakTools: A new platform for disease outbreak analysis using the R software

Por Jombart, Thibaut, Aanensen, David M., Baguelin, Marc, Birrell, Paul, Cauchemez, Simon, Camacho, Anton, Colijn, Caroline, Collins, Caitlin, Cori, Anne, Didelot, Xavier, Fraser, Christophe, Frost, Simon, Hens, Niel, Hugues, Joseph, Höhle, Michael, Opatowski, Lulla, Rambaut, Andrew, Ratmann, Oliver, Soubeyrand, Samuel, Suchard, Marc A., Wallinga, Jacco, Ypma, Rolf, Ferguson, Neil
Publicado em 2014