Regression-Based Ranking of Pathogen Strains with Respect to Their Contribution to Natural Epidemics

Por Soubeyrand, Samuel, Tollenaere, Charlotte, Haon-Lasportes, Emilie, Laine, Anna-Liisa
Publicado em 2014

A Bayesian Inference Framework to Reconstruct Transmission Trees Using Epidemiological and Genetic Data

Por Morelli, Marco J., Thébaud, Gaël, Chadœuf, Joël, King, Donald P., Haydon, Daniel T., Soubeyrand, Samuel
Publicado em 2012

A Bayesian approach for inferring the dynamics of partially observed endemic infectious diseases from space-time-genetic data

Por Mollentze, Nardus, Nel, Louis H., Townsend, Sunny, le Roux, Kevin, Hampson, Katie, Haydon, Daniel T., Soubeyrand, Samuel
Publicado em 2014

Using sensitivity analysis to identify key factors for the propagation of a plant epidemic

Por Rimbaud, Loup, Bruchou, Claude, Dallot, Sylvie, Pleydell, David R. J., Jacquot, Emmanuel, Soubeyrand, Samuel, Thébaud, Gaël
Publicado no R Soc Open Sci (2018)

Colony adaptive response to simulated heat waves and consequences at the individual level in honeybees (Apis mellifera)

Por Bordier, Célia, Dechatre, Hélène, Suchail, Séverine, Peruzzi, Mathilde, Soubeyrand, Samuel, Pioz, Maryline, Pélissier, Michel, Crauser, Didier, Conte, Yves Le, Alaux, Cédric
Publicado no Sci Rep (2017)

Long-Distance Wind-Dispersal of Spores in a Fungal Plant Pathogen: Estimation of Anisotropic Dispersal Kernels from an Extensive Field Experiment

Por Rieux, Adrien, Soubeyrand, Samuel, Bonnot, François, Klein, Etienne K., Ngando, Josue E., Mehl, Andreas, Ravigne, Virginie, Carlier, Jean, de Lapeyre de Bellaire, Luc
Publicado em 2014

OutbreakTools: A new platform for disease outbreak analysis using the R software

Por Jombart, Thibaut, Aanensen, David M., Baguelin, Marc, Birrell, Paul, Cauchemez, Simon, Camacho, Anton, Colijn, Caroline, Collins, Caitlin, Cori, Anne, Didelot, Xavier, Fraser, Christophe, Frost, Simon, Hens, Niel, Hugues, Joseph, Höhle, Michael, Opatowski, Lulla, Rambaut, Andrew, Ratmann, Oliver, Soubeyrand, Samuel, Suchard, Marc A., Wallinga, Jacco, Ypma, Rolf, Ferguson, Neil
Publicado em 2014