Examining the significance of fingerprint-based classifiers

Por Luke, Brian T, Collins, Jack R
Publicado em 2008

Can Structural Features of Kinase Receptors Provide Clues on Selectivity and Inhibition?: A Molecular Modeling Study

Por Ravichandran, Sarangan, Luke, Brian T., Collins, Jack R.
Publicado no J Mol Graph Model (2015)

A molecular model of the enantioselective liquid chromatographic separation of (R,S)-ifosfamide and its N-dechloroethylated metabolites on a teicoplanin aglycon chiral stationary p...

Por Ravichandran, Sarangan, Collins, Jack R., Singh, Nagendra, Wainer, Irving W.
Publicado em 2012

Structural conservation of interferon gamma among vertebrates

Por Savan, Ram, Ravichandran, Sarangan, Collins, Jack R., Sakai, Masahiro, Young, Howard A.
Publicado em 2009

The Role of Methylation in the Intrinsic Dynamics of B- and Z-DNA

Por Temiz, Nuri A., Donohue, Duncan E., Bacolla, Albino, Luke, Brian T., Collins, Jack R.
Publicado em 2012

AVIA v2.0: annotation, visualization and impact analysis of genomic variants and genes

Por Vuong, Hue, Che, Anney, Ravichandran, Sarangan, Luke, Brian T., Collins, Jack R., Mudunuri, Uma S.
Publicado no Bioinformatics (2015)

Abundance and length of simple repeats in vertebrate genomes are determined by their structural properties

Por Bacolla, Albino, Larson, Jacquelynn E., Collins, Jack R., Li, Jian, Milosavljevic, Aleksandar, Stenson, Peter D., Cooper, David N., Wells, Robert D.
Publicado em 2008

Non-B DB: a database of predicted non-B DNA-forming motifs in mammalian genomes

Por Cer, Regina Z., Bruce, Kevin H., Mudunuri, Uma S., Yi, Ming, Volfovsky, Natalia, Luke, Brian T., Bacolla, Albino, Collins, Jack R., Stephens, Robert M.
Publicado em 2011

Non-B DNA-forming Sequences and WRN Deficiency Independently Increase the Frequency of Base Substitution in Human Cells

Por Bacolla, Albino, Wang, Guliang, Jain, Aklank, Chuzhanova, Nadia A., Cer, Regina Z., Collins, Jack R., Cooper, David N., Bohr, Vilhelm A., Vasquez, Karen M.
Publicado em 2011

The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists

Por Huang, Da Wei, Sherman, Brad T, Tan, Qina, Collins, Jack R, Alvord, W Gregory, Roayaei, Jean, Stephens, Robert, Baseler, Michael W, Lane, H Clifford, Lempicki, Richard A
Publicado em 2007

Introducing the non-B DNA Motif Search Tool (nBMST)

Por Cer, Regina Z, Bruce, Kevin H, Donohue, Duncan E, Temiz, Alpay N, Bacolla, Albino, Mudunuri, Uma S, Yi, Ming, Volfovsky, Natalia, Luke, Brian T, Collins, Jack R, Stephens, Robert M
Publicado em 2011

The somatic autosomal mutation matrix in cancer genomes

Por Temiz, Nuri A., Donohue, Duncan E., Bacolla, Albino, Vasquez, Karen M., Cooper, David N., Mudunuri, Uma, Ivanic, Joseph, Cer, Regina Z., Yi, Ming, Stephens, Robert M., Collins, Jack R., Luke, Brian T.
Publicado no Hum Genet (2015)

Erratum to: The somatic autosomal mutation matrix in cancer genomes

Por Temiz, Nuri A., Donohue, Duncan E., Bacolla, Albino, Vasquez, Karen M., Cooper, David N., Mudunuri, Uma, Ivanic, Joseph, Cer, Regina Z., Yi, Ming, Stephens, Robert M., Collins, Jack R., Luke, Brian T.
Publicado no Hum Genet (2015)

Long homopurine•homopyrimidine sequences are characteristic of genes expressed in brain and the pseudoautosomal region

Por Bacolla, Albino, Collins, Jack R., Gold, Bert, Chuzhanova, Nadia, Yi, Ming, Stephens, Robert M., Stefanov, Stefan, Olsh, Adam, Jakupciak, John P., Dean, Michael, Lempicki, Richard A., Cooper, David N., Wells, Robert D.
Publicado em 2006

Non-B DB v2.0: a database of predicted non-B DNA-forming motifs and its associated tools

Por Cer, Regina Z., Donohue, Duncan E., Mudunuri, Uma S., Temiz, Nuri A., Loss, Michael A., Starner, Nathan J., Halusa, Goran N., Volfovsky, Natalia, Yi, Ming, Luke, Brian T., Bacolla, Albino, Collins, Jack R., Stephens, Robert M.
Publicado em 2013

Guanine Holes Are Prominent Targets for Mutation in Cancer and Inherited Disease

Por Bacolla, Albino, Temiz, Nuri A., Yi, Ming, Ivanic, Joseph, Cer, Regina Z., Donohue, Duncan E., Ball, Edward V., Mudunuri, Uma S., Wang, Guliang, Jain, Aklank, Volfovsky, Natalia, Luke, Brian T., Stephens, Robert M., Cooper, David N., Collins, Jack R., Vasquez, Karen M.
Publicado em 2013