Principal component analysis is limited to low-resolution analysis in cryoEM

Autor Sorzano, Carlos Oscar S., Carazo, Jose Maria
Vydáno v Acta Crystallogr D Struct Biol (2021)

Introducing robustness to maximum-likelihood refinement of electron-microsopy data

Autor Scheres, Sjors H. W., Carazo, José-María
Vydáno 2009

Moara: a Java library for extracting and normalizing gene and protein mentions

Autor Pascual-Montano Alberto, Carazo José-María, Neves Mariana L
Vydáno 2010-03-01

Moara: a Java library for extracting and normalizing gene and protein mentions

Autor Neves, Mariana L, Carazo, José-María, Pascual-Montano, Alberto
Vydáno 2010

Error analysis in the determination of the electron microscopical contrast transfer function parameters from experimental power Spectra

Autor Sorzano, Carlos Oscar S, Otero, Abraham, Olmos, Estefanía M, Carazo, José María
Vydáno 2009

Averaging of Electron Subtomograms and Random Conical Tilt Reconstructions through Likelihood Optimization

Autor Scheres, Sjors H.W., Melero, Roberto, Valle, Mikel, Carazo, Jose-Maria
Vydáno 2009

3DCONS-DB: A Database of Position-Specific Scoring Matrices in Protein Structures

Autor Sanchez-Garcia, Ruben, Sorzano, Carlos Oscar Sanchez, Carazo, Jose Maria, Segura, Joan
Vydáno v Molecules (2017)

Sequence-related protein export NTPases encoded by the conjugative transfer region of RP4 and by the cag pathogenicity island of Helicobacter pylori share similar hexameric ring st...

Autor Krause, Sabine, Bárcena, Montserrat, Pansegrau, Werner, Lurz, Rudi, Carazo, José María, Lanka, Erich
Vydáno 2000

Maximum likelihood refinement of electron microscopy data with normalization errors

Autor Scheres, Sjors H.W., Valle, Mikel, Grob, Patricia, Nogales, Eva, Carazo, José-María
Vydáno 2009

aGEM: an integrative system for analyzing spatial-temporal gene-expression information

Autor Jiménez-Lozano, Natalia, Segura, Joan, Macías, José Ramón, Vega, Juanjo, Carazo, José María
Vydáno 2009

Maximum-likelihood methods in cryo-EM. Part I: theoretical basis and overview of existing approaches

Autor Sigworth, Fred J., Doerschuk, Peter C., Carazo, Jose-Maria, Scheres, Sjors H.W.
Vydáno 2010

Deep Consensus, a deep learning-based approach for particle pruning in cryo-electron microscopy

Autor Sanchez-Garcia, Ruben, Segura, Joan, Maluenda, David, Carazo, Jose Maria, Sorzano, Carlos Oscar S.
Vydáno v IUCrJ (2018)

DeepRes: a new deep-learning- and aspect-based local resolution method for electron-microscopy maps

Autor Ramírez-Aportela, Erney, Mota, Javier, Conesa, Pablo, Carazo, Jose Maria, Sorzano, Carlos Oscar S.
Vydáno v IUCrJ (2019)

CentrosomeDB: a human centrosomal proteins database

Autor Nogales-Cadenas, Rubén, Abascal, Federico, Díez-Pérez, Javier, Carazo, José María, Pascual-Montano, Alberto
Vydáno 2009

Measuring local-directional resolution and local anisotropy in cryo-EM maps

Autor Vilas, Jose Luis, Tagare, Hemant D., Vargas, Javier, Carazo, Jose Maria, Sorzano, Carlos Oscar S.
Vydáno v Nat Commun (2020)

Image processing for electron microscopy single-particle analysis using XMIPP

Autor Scheres, Sjors H W, Núñez-Ramírez, Rafael, Sorzano, Carlos O S, Carazo, José María, Marabini, Roberto
Vydáno 2008

StructMap: Elastic Distance Analysis of Electron Microscopy Maps for Studying Conformational Changes

Autor Sanchez Sorzano, Carlos Oscar, Alvarez-Cabrera, Ana Lucia, Kazemi, Mohsen, Carazo, Jose María, Jonić, Slavica
Vydáno v Biophys J (2016)

Comparison of molecular dynamics and superfamily spaces of protein domain deformation

Autor Velázquez-Muriel, Javier A, Rueda, Manuel, Cuesta, Isabel, Pascual-Montano, Alberto, Orozco, Modesto, Carazo, José-María
Vydáno 2009

DeepEMhancer: a deep learning solution for cryo-EM volume post-processing

Autor Sanchez-Garcia, Ruben, Gomez-Blanco, Josue, Cuervo, Ana, Carazo, Jose Maria, Sorzano, Carlos Oscar S., Vargas, Javier
Vydáno v Commun Biol (2021)

3DIANA: 3D Domain Interaction Analysis: A Toolbox for Quaternary Structure Modeling

Autor Segura, Joan, Sanchez-Garcia, Ruben, Tabas-Madrid, Daniel, Cuenca-Alba, Jesus, Sorzano, Carlos Oscar S., Carazo, Jose Maria
Vydáno v Biophys J (2016)