Improved coarse-graining of Markov state models via explicit consideration of statistical uncertainty

per Bowman, Gregory R.
Publicat 2012

The Roles of Entropy and Kinetics in Structure Prediction

per Bowman, Gregory R., Pande, Vijay S.
Publicat 2009

Protein folded states are kinetic hubs

per Bowman, Gregory R., Pande, Vijay S.
Publicat 2010

Quantifying allosteric communication via both concerted structural changes and conformational disorder with CARDS

per Singh, Sukrit, Bowman, Gregory R.
Publicat a J Chem Theory Comput (2017)

Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites

per Bowman, Gregory R., Geissler, Phillip L.
Publicat 2012

Extensive Conformational Heterogeneity within Protein Cores

per Bowman, Gregory R., Geissler, Phillip L.
Publicat 2014

Using generalized ensemble simulations and Markov state models to identify conformational states

per Bowman, Gregory R., Huang, Xuhui, Pande, Vijay S.
Publicat 2009

Convergence of folding free energy landscapes via application of enhanced sampling methods in a distributed computing environment

per Huang, Xuhui, Bowman, Gregory R., Pande, Vijay S.
Publicat 2008

Everything you wanted to know about Markov State Models but were afraid to ask

per Pande, Vijay S., Beauchamp, Kyle, Bowman, Gregory R.
Publicat 2010

Quantitative comparison of alternative methods for coarse-graining biological networks

per Bowman, Gregory R., Meng, Luming, Huang, Xuhui
Publicat 2013

Network models for molecular kinetics and their initial applications to human health

per Bowman, Gregory R, Huang, Xuhui, Pande, Vijay S
Publicat a Cell Res (2010)

Atomistic folding simulations of the five helix bundle protein λ(6–85)

per Bowman, Gregory R., Voelz, Vincent A., Pande, Vijay S.
Publicat 2011

Taming the complexity of protein folding

per Bowman, Gregory R., Voelz, Vincent A., Pande, Vijay S.
Publicat 2011

Enhanced modeling via network theory: Adaptive sampling of Markov state models

per Bowman, Gregory R., Ensign, Daniel L., Pande, Vijay S.
Publicat 2010

Rapid equilibrium sampling initiated from nonequilibrium data

per Huang, Xuhui, Bowman, Gregory R., Bacallado, Sergio, Pande, Vijay S.
Publicat 2009

Advanced methods for accessing protein shape-shifting present new therapeutic opportunities

per Knoverek, Catherine R., Amarasinghe, Gaya K., Bowman, Gregory R.
Publicat a Trends Biochem Sci (2018)

Probing the Nanosecond Dynamics of a Designed Three-Stranded Beta-Sheet with a Massively Parallel Molecular Dynamics Simulation

per Voelz, Vincent A., Luttmann, Edgar, Bowman, Gregory R., Pande, Vijay S.
Publicat 2009

Progress and challenges in the automated construction of Markov state models for full protein systems

per Bowman, Gregory R., Beauchamp, Kyle A., Boxer, George, Pande, Vijay S.
Publicat 2009

Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1–39)

per Voelz, Vincent A., Bowman, Gregory R., Beauchamp, Kyle, Pande, Vijay S.
Publicat 2010

Simulation of spontaneous G protein activation reveals a new intermediate driving GDP unbinding

per Sun, Xianqiang, Singh, Sukrit, Blumer, Kendall J, Bowman, Gregory R
Publicat a eLife (2018)