Ancient pathogen genomics as an emerging tool for infectious disease research

Por Spyrou, Maria A., Bos, Kirsten I., Herbig, Alexander, Krause, Johannes
Publicado no Nat Rev Genet (2019)

HOPS: automated detection and authentication of pathogen DNA in archaeological remains

Por Hübler, Ron, Key, Felix M., Warinner, Christina, Bos, Kirsten I., Krause, Johannes, Herbig, Alexander
Publicado no Genome Biol (2019)

Yersinia pestis: New Evidence for an Old Infection

Por Bos, Kirsten I., Stevens, Philip, Nieselt, Kay, Poinar, Hendrik N., DeWitte, Sharon N., Krause, Johannes
Publicado em 2012

A58 Epidemic dynamics of ancient disease outbreaks

Por Esquivel Gomez, Luis R, Spyrou, Maria A, Keller, Marcel, Herbig, Alexander, Bos, Kirsten I, Krause, Johannes, Kühnert, Denise
Publicado no Virus Evol (2019)

A seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complex

Por Sabin, Susanna, Herbig, Alexander, Vågene, Åshild J., Ahlström, Torbjörn, Bozovic, Gracijela, Arcini, Caroline, Kühnert, Denise, Bos, Kirsten I.
Publicado no Genome Biol (2020)

Screening ancient tuberculosis with qPCR: challenges and opportunities

Por Harkins, Kelly M., Buikstra, Jane E., Campbell, Tessa, Bos, Kirsten I., Johnson, Eric D., Krause, Johannes, Stone, Anne C.
Publicado no Philos Trans R Soc Lond B Biol Sci (2015)

Parallel detection of ancient pathogens via array-based DNA capture

Por Bos, Kirsten I., Jäger, Günter, Schuenemann, Verena J., Vågene, Åshild J., Spyrou, Maria A., Herbig, Alexander, Nieselt, Kay, Krause, Johannes
Publicado no Philos Trans R Soc Lond B Biol Sci (2015)

A treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15(th) century Europe

Por Giffin, Karen, Lankapalli, Aditya Kumar, Sabin, Susanna, Spyrou, Maria A., Posth, Cosimo, Kozakaitė, Justina, Friedrich, Ronny, Miliauskienė, Žydrūnė, Jankauskas, Rimantas, Herbig, Alexander, Bos, Kirsten I.
Publicado no Sci Rep (2020)

Quantitative Assessment of the Sensitivity of Various Commercial Reverse Transcriptases Based on Armored HIV RNA

Por Okello, John B. A., Rodriguez, Linda, Poinar, Debi, Bos, Kirsten, Okwi, Andrew L., Bimenya, Gabriel S., Sewankambo, Nelson K., Henry, Kenneth R., Kuch, Melanie, Poinar, Hendrik N.
Publicado em 2010

Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains

Por Schuenemann, Verena J., Kumar Lankapalli, Aditya, Barquera, Rodrigo, Nelson, Elizabeth A., Iraíz Hernández, Diana, Acuña Alonzo, Víctor, Bos, Kirsten I., Márquez Morfín, Lourdes, Herbig, Alexander, Krause, Johannes
Publicado no PLoS Negl Trop Dis (2018)

A High-Coverage Yersinia pestis Genome from a Sixth-Century Justinianic Plague Victim

Por Feldman, Michal, Harbeck, Michaela, Keller, Marcel, Spyrou, Maria A., Rott, Andreas, Trautmann, Bernd, Scholz, Holger C., Päffgen, Bernd, Peters, Joris, McCormick, Michael, Bos, Kirsten, Herbig, Alexander, Krause, Johannes
Publicado no Mol Biol Evol (2016)

Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague

Por Spyrou, Maria A., Tukhbatova, Rezeda I., Wang, Chuan-Chao, Valtueña, Aida Andrades, Lankapalli, Aditya K., Kondrashin, Vitaly V., Tsybin, Victor A., Khokhlov, Aleksandr, Kühnert, Denise, Herbig, Alexander, Bos, Kirsten I., Krause, Johannes
Publicado no Nat Commun (2018)

Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black Death

Por Schuenemann, Verena J., Bos, Kirsten, DeWitte, Sharon, Schmedes, Sarah, Jamieson, Joslyn, Mittnik, Alissa, Forrest, Stephen, Coombes, Brian K., Wood, James W., Earn, David J. D., White, William, Krause, Johannes, Poinar, Hendrik N.
Publicado em 2011

Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus

Por Bos, Kirsten I, Herbig, Alexander, Sahl, Jason, Waglechner, Nicholas, Fourment, Mathieu, Forrest, Stephen A, Klunk, Jennifer, Schuenemann, Verena J, Poinar, Debi, Kuch, Melanie, Golding, G Brian, Dutour, Olivier, Keim, Paul, Wagner, David M, Holmes, Edward C, Krause, Johannes, Poinar, Hendrik N
Publicado no eLife (2016)

A draft genome of Yersinia pestis from victims of the Black Death

Por Bos, Kirsten I., Schuenemann, Verena J., Golding, G. Brian, Burbano, Hernán A., Waglechner, Nicholas, Coombes, Brian K., McPhee, Joseph B., DeWitte, Sharon N., Meyer, Matthias, Schmedes, Sarah, Wood, James, Earn, David J. D., Herring, D. Ann, Bauer, Peter, Poinar, Hendrik N., Krause, Johannes
Publicado em 2011

A revised timescale for human evolution based on ancient mitochondrial genomes

Por Fu, Qiaomei, Mittnik, Alissa, Johnson, Philip L.F., Bos, Kirsten, Lari, Martina, Bollongino, Ruth, Sun, Chengkai, Giemsch, Liane, Schmitz, Ralf, Burger, Joachim, Ronchitelli, Anna Maria, Martini, Fabio, Cremonesi, Renata G., Svoboda, Jiří, Bauer, Peter, Caramelli, David, Castellano, Sergi, Reich, David, Pääbo, Svante, Krause, Johannes
Publicado no Curr Biol (2013)

Effect of X-ray irradiation on ancient DNA in sub-fossil bones – Guidelines for safe X-ray imaging

Por Immel, Alexander, Le Cabec, Adeline, Bonazzi, Marion, Herbig, Alexander, Temming, Heiko, Schuenemann, Verena J., Bos, Kirsten I., Langbein, Frauke, Harvati, Katerina, Bridault, Anne, Pion, Gilbert, Julien, Marie-Anne, Krotova, Oleksandra, Conard, Nicholas J., Münzel, Susanne C., Drucker, Dorothée G., Viola, Bence, Hublin, Jean-Jacques, Tafforeau, Paul, Krause, Johannes
Publicado no Sci Rep (2016)

Differential preservation of endogenous human and microbial DNA in dental calculus and dentin

Por Mann, Allison E., Sabin, Susanna, Ziesemer, Kirsten, Vågene, Åshild J., Schroeder, Hannes, Ozga, Andrew T., Sankaranarayanan, Krithivasan, Hofman, Courtney A., Fellows Yates, James A., Salazar-García, Domingo C., Frohlich, Bruno, Aldenderfer, Mark, Hoogland, Menno, Read, Christopher, Milner, George R., Stone, Anne C., Lewis, Cecil M., Krause, Johannes, Hofman, Corinne, Bos, Kirsten I., Warinner, Christina
Publicado no Sci Rep (2018)

Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750)

Por Keller, Marcel, Spyrou, Maria A., Scheib, Christiana L., Neumann, Gunnar U., Kröpelin, Andreas, Haas-Gebhard, Brigitte, Päffgen, Bernd, Haberstroh, Jochen, Ribera i Lacomba, Albert, Raynaud, Claude, Cessford, Craig, Durand, Raphaël, Stadler, Peter, Nägele, Kathrin, Bates, Jessica S., Trautmann, Bernd, Inskip, Sarah A., Peters, Joris, Robb, John E., Kivisild, Toomas, Castex, Dominique, McCormick, Michael, Bos, Kirsten I., Harbeck, Michaela, Herbig, Alexander, Krause, Johannes
Publicado no Proc Natl Acad Sci U S A (2019)

Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis

Por Bos, Kirsten I., Harkins, Kelly M., Herbig, Alexander, Coscolla, Mireia, Weber, Nico, Comas, Iñaki, Forrest, Stephen A., Bryant, Josephine M., Harris, Simon R., Schuenemann, Verena J., Campbell, Tessa J., Majander, Kerrtu, Wilbur, Alicia K., Guichon, Ricardo A., Wolfe Steadman, Dawnie L., Cook, Della Collins, Niemann, Stefan, Behr, Marcel A., Zumarraga, Martin, Bastida, Ricardo, Huson, Daniel, Nieselt, Kay, Young, Douglas, Parkhill, Julian, Buikstra, Jane E., Gagneux, Sebastien, Stone, Anne C., Krause, Johannes
Publicado no Nature (2014)