PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change

von Fourment, Mathieu, Gibbs, Mark J
Veröffentlicht 2006

The VirusBanker database uses a Java program to allow flexible searching through Bunyaviridae sequences

von Fourment, Mathieu, Gibbs, Mark J
Veröffentlicht 2008

A comparison of common programming languages used in bioinformatics

von Fourment, Mathieu, Gillings, Michael R
Veröffentlicht 2008

Novel non-parametric models to estimate evolutionary rates and divergence times from heterochronous sequence data

von Fourment, Mathieu, Holmes, Edward C
Veröffentlicht in BMC Evol Biol (2014)

Avian influenza virus exhibits distinct evolutionary dynamics in wild birds and poultry

von Fourment, Mathieu, Holmes, Edward C
Veröffentlicht in BMC Evol Biol (2015)

Seqotron: a user-friendly sequence editor for Mac OS X

von Fourment, Mathieu, Holmes, Edward C.
Veröffentlicht in BMC Res Notes (2016)

Local and relaxed clocks: the best of both worlds

von Fourment, Mathieu, Darling, Aaron E.
Veröffentlicht in PeerJ (2018)

Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics

von Fourment, Mathieu, Darling, Aaron E.
Veröffentlicht in PeerJ (2019)

Evidence for Persistence of and Antiviral Resistance and Reassortment Events in Seasonal Influenza Virus Strains Circulating in Cambodia

von Fourment, Mathieu, Mardy, Sek, Channa, Mey, Buchy, Philippe
Veröffentlicht 2010

The impact of migratory flyways on the spread of avian influenza virus in North America

von Fourment, Mathieu, Darling, Aaron E., Holmes, Edward C.
Veröffentlicht in BMC Evol Biol (2017)

The Biological Object Notation (BON): a structured file format for biological data

von Buchmann, Jan P., Fourment, Mathieu, Holmes, Edward C.
Veröffentlicht in Sci Rep (2018)

Inconsistencies in Estimating the Age of HIV-1 Subtypes Due to Heterotachy

von Wertheim, Joel O., Fourment, Mathieu, Kosakovsky Pond, Sergei L.
Veröffentlicht 2012

A Surrogate Function for One-Dimensional Phylogenetic Likelihoods

von Claywell, Brian C, Dinh, Vu, Fourment, Mathieu, McCoy, Connor O, Matsen IV, Frederick A
Veröffentlicht in Mol Biol Evol (2018)

19 Dubious Ways to Compute the Marginal Likelihood of a Phylogenetic Tree Topology

von Fourment, Mathieu, Magee, Andrew F, Whidden, Chris, Bilge, Arman, Matsen, Frederick A, Minin, Vladimir N
Veröffentlicht in Syst Biol (2020)

Systematic Exploration of the High Likelihood Set of Phylogenetic Tree Topologies

von Whidden, Chris, Claywell, Brian C, Fisher, Thayer, Magee, Andrew F, Fourment, Mathieu, Matsen, Frederick A
Veröffentlicht in Syst Biol (2020)

Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design

von Zheng, Linda, Wayper, Paul J., Gibbs, Adrian J., Fourment, Mathieu, Rodoni, Brendan C., Gibbs, Mark J.
Veröffentlicht 2008

A Random Effects Branch-Site Model for Detecting Episodic Diversifying Selection

von Kosakovsky Pond, Sergei L., Murrell, Ben, Fourment, Mathieu, Frost, Simon D.W., Delport, Wayne, Scheffler, Konrad
Veröffentlicht 2011

Effective Online Bayesian Phylogenetics via Sequential Monte Carlo with Guided Proposals

von Fourment, Mathieu, Claywell, Brian C, Dinh, Vu, McCoy, Connor, Matsen IV, Frederick A, Darling, Aaron E
Veröffentlicht in Syst Biol (2018)

Chimpanzee Malaria Parasites Related to Plasmodium ovale in Africa

von Duval, Linda, Nerrienet, Eric, Rousset, Dominique, Sadeuh Mba, Serge Alain, Houze, Sandrine, Fourment, Mathieu, Le Bras, Jacques, Robert, Vincent, Ariey, Frederic
Veröffentlicht 2009

Genome-scale rates of evolutionary change in bacteria

von Duchêne, Sebastian, Holt, Kathryn E., Weill, François-Xavier, Le Hello, Simon, Hawkey, Jane, Edwards, David J., Fourment, Mathieu, Holmes, Edward C.
Veröffentlicht in Microb Genom (2016)