PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change

Por Fourment, Mathieu, Gibbs, Mark J
Publicado em 2006

The VirusBanker database uses a Java program to allow flexible searching through Bunyaviridae sequences

Por Fourment, Mathieu, Gibbs, Mark J
Publicado em 2008

A comparison of common programming languages used in bioinformatics

Por Fourment, Mathieu, Gillings, Michael R
Publicado em 2008

Novel non-parametric models to estimate evolutionary rates and divergence times from heterochronous sequence data

Por Fourment, Mathieu, Holmes, Edward C
Publicado no BMC Evol Biol (2014)

Avian influenza virus exhibits distinct evolutionary dynamics in wild birds and poultry

Por Fourment, Mathieu, Holmes, Edward C
Publicado no BMC Evol Biol (2015)

Seqotron: a user-friendly sequence editor for Mac OS X

Por Fourment, Mathieu, Holmes, Edward C.
Publicado no BMC Res Notes (2016)

Local and relaxed clocks: the best of both worlds

Por Fourment, Mathieu, Darling, Aaron E.
Publicado no PeerJ (2018)

Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics

Por Fourment, Mathieu, Darling, Aaron E.
Publicado no PeerJ (2019)

Evidence for Persistence of and Antiviral Resistance and Reassortment Events in Seasonal Influenza Virus Strains Circulating in Cambodia

Por Fourment, Mathieu, Mardy, Sek, Channa, Mey, Buchy, Philippe
Publicado em 2010

The impact of migratory flyways on the spread of avian influenza virus in North America

Por Fourment, Mathieu, Darling, Aaron E., Holmes, Edward C.
Publicado no BMC Evol Biol (2017)

The Biological Object Notation (BON): a structured file format for biological data

Por Buchmann, Jan P., Fourment, Mathieu, Holmes, Edward C.
Publicado no Sci Rep (2018)

Inconsistencies in Estimating the Age of HIV-1 Subtypes Due to Heterotachy

Por Wertheim, Joel O., Fourment, Mathieu, Kosakovsky Pond, Sergei L.
Publicado em 2012

A Surrogate Function for One-Dimensional Phylogenetic Likelihoods

Por Claywell, Brian C, Dinh, Vu, Fourment, Mathieu, McCoy, Connor O, Matsen IV, Frederick A
Publicado no Mol Biol Evol (2018)

19 Dubious Ways to Compute the Marginal Likelihood of a Phylogenetic Tree Topology

Por Fourment, Mathieu, Magee, Andrew F, Whidden, Chris, Bilge, Arman, Matsen, Frederick A, Minin, Vladimir N
Publicado no Syst Biol (2020)

Systematic Exploration of the High Likelihood Set of Phylogenetic Tree Topologies

Por Whidden, Chris, Claywell, Brian C, Fisher, Thayer, Magee, Andrew F, Fourment, Mathieu, Matsen, Frederick A
Publicado no Syst Biol (2020)

Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design

Por Zheng, Linda, Wayper, Paul J., Gibbs, Adrian J., Fourment, Mathieu, Rodoni, Brendan C., Gibbs, Mark J.
Publicado em 2008

A Random Effects Branch-Site Model for Detecting Episodic Diversifying Selection

Por Kosakovsky Pond, Sergei L., Murrell, Ben, Fourment, Mathieu, Frost, Simon D.W., Delport, Wayne, Scheffler, Konrad
Publicado em 2011

Effective Online Bayesian Phylogenetics via Sequential Monte Carlo with Guided Proposals

Por Fourment, Mathieu, Claywell, Brian C, Dinh, Vu, McCoy, Connor, Matsen IV, Frederick A, Darling, Aaron E
Publicado no Syst Biol (2018)

Chimpanzee Malaria Parasites Related to Plasmodium ovale in Africa

Por Duval, Linda, Nerrienet, Eric, Rousset, Dominique, Sadeuh Mba, Serge Alain, Houze, Sandrine, Fourment, Mathieu, Le Bras, Jacques, Robert, Vincent, Ariey, Frederic
Publicado em 2009

Genome-scale rates of evolutionary change in bacteria

Por Duchêne, Sebastian, Holt, Kathryn E., Weill, François-Xavier, Le Hello, Simon, Hawkey, Jane, Edwards, David J., Fourment, Mathieu, Holmes, Edward C.
Publicado no Microb Genom (2016)