rQuant.web: a tool for RNA-Seq-based transcript quantitation

por Bohnert, Regina, Rätsch, Gunnar
Publicado 2010

Transcript quantification with RNA-Seq data

por Bohnert, Regina, Behr, Jonas, Rätsch, Gunnar
Publicado 2009

Comprehensive benchmarking of SNV callers for highly admixed tumor data

por Bohnert, Regina, Vivas, Sonia, Jansen, Gunther
Publicado en PLoS One (2017)

Reliability of algorithmic somatic copy number alteration detection from targeted capture data

por Rieber, Nora, Bohnert, Regina, Ziehm, Ulrike, Jansen, Gunther
Publicado en Bioinformatics (2017)

Accurate detection of differential RNA processing

por Drewe, Philipp, Stegle, Oliver, Hartmann, Lisa, Kahles, André, Bohnert, Regina, Wachter, Andreas, Borgwardt, Karsten, Rätsch, Gunnar
Publicado 2013

Oqtans: the RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis

por Sreedharan, Vipin T., Schultheiss, Sebastian J., Jean, Géraldine, Kahles, André, Bohnert, Regina, Drewe, Philipp, Mudrakarta, Pramod, Görnitz, Nico, Zeller, Georg, Rätsch, Gunnar
Publicado 2014

Oqtans: a multifunctional workbench for RNA-seq data analysis

por Sreedharan, Vipin T, Schultheiss, Sebastian J, Jean, Géraldine, Kahles, André, Bohnert, Regina, Drewe, Philipp, Mudrakarta, Pramod, Görnitz, Nico, Zeller, Georg, Rätsch, Gunnar
Publicado 2014

Oqtans: a Galaxy-integrated workflow for quantitative transcriptome analysis from NGS Data

por Schultheiss, Sebastian J, Jean, Géraldine, Behr, Jonas, Bohnert, Regina, Drewe, Philipp, Görnitz, Nico, Kahles, André, Mudrakarta, Pramod, Sreedharan, Vipin T, Zeller, Georg, Rätsch, Gunnar
Publicado 2011

Bioinformatory‐assisted analysis of next‐generation sequencing data for precision medicine in pancreatic cancer

por Malgerud, Linnéa, Lindberg, Johan, Wirta, Valtteri, Gustafsson‐Liljefors, Maria, Karimi, Masoud, Moro, Carlos Fernández, Stecker, Katrin, Picker, Alexander, Huelsewig, Carolin, Stein, Martin, Bohnert, Regina, Del Chiaro, Marco, Haas, Stephan L., Heuchel, Rainer L., Permert, Johan, Maeurer, Markus J., Brock, Stephan, Verbeke, Caroline S., Engstrand, Lars, Jackson, David B., Grönberg, Henrik, Löhr, Johannes‐Matthias
Publicado en Mol Oncol (2017)

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

por Gan, Xiangchao, Stegle, Oliver, Behr, Jonas, Steffen, Joshua G., Drewe, Philipp, Hildebrand, Katie L., Lyngsoe, Rune, Schultheiss, Sebastian J., Osborne, Edward J., Sreedharan, Vipin T., Kahles, André, Bohnert, Regina, Jean, Géraldine, Derwent, Paul, Kersey, Paul, Belfield, Eric J., Harberd, Nicholas P., Kemen, Eric, Toomajian, Christopher, Kover, Paula X., Clark, Richard M., Rátsch, Gunnar, Mott, Richard
Publicado en Nature (2011)

Genomewide SNP variation reveals relationships among landraces and modern varieties of rice

por McNally, Kenneth L., Childs, Kevin L., Bohnert, Regina, Davidson, Rebecca M., Zhao, Keyan, Ulat, Victor J., Zeller, Georg, Clark, Richard M., Hoen, Douglas R., Bureau, Thomas E., Stokowski, Renee, Ballinger, Dennis G., Frazer, Kelly A., Cox, David R., Padhukasahasram, Badri, Bustamante, Carlos D., Weigel, Detlef, Mackill, David J., Bruskiewich, Richard M., Rätsch, Gunnar, Buell, C. Robin, Leung, Hei, Leach, Jan E.
Publicado 2009