Inferring the hydrophobic interaction from the properties of neat water.

od Berne, B J
Wydane 1996

Catalytic tempering: A method for sampling rough energy landscapes by Monte Carlo

od Stolovitzky, Gustavo, Berne, B. J.
Wydane 2000

Spectral gap optimization of order parameters for sampling complex molecular systems

od Tiwary, Pratyush, Berne, B. J.
Wydane w Proc Natl Acad Sci U S A (2016)

Kramers turnover: From energy diffusion to spatial diffusion using metadynamics

od Tiwary, Pratyush, Berne, B. J.
Wydane w J Chem Phys (2016)

How wet should be the reaction coordinate for ligand unbinding?

od Tiwary, Pratyush, Berne, B. J.
Wydane w J Chem Phys (2016)

Predicting reaction coordinates in energy landscapes with diffusion anisotropy

od Tiwary, Pratyush, Berne, B. J.
Wydane w J Chem Phys (2017)

Number fluctuation spectroscopy of motile microorganisms.

od Schaefer, D W, Berne, B J
Wydane 1975

Unraveling quantum mechanical effects in water using isotopic fractionation

od Markland, Thomas E., Berne, B. J.
Wydane 2012

First passage time distribution in stochastic processes with moving and static absorbing boundaries with application to biological rupture experiments

od Hu, Zhonghan, Cheng, Liwen, Berne, B. J.
Wydane 2010

When Does TMAO Fold a Polymer Chain and Urea Unfold It?

od Mondal, Jagannath, Stirnemann, Guillaume, Berne, B. J.
Wydane 2013

How and when does an anticancer drug leave its binding site?

od Tiwary, Pratyush, Mondal, Jagannath, Berne, B. J.
Wydane w Sci Adv (2017)

Dewetting-induced collapse of hydrophobic particles

od Huang, X., Margulis, C. J., Berne, B. J.
Wydane 2003

Thermal and Structural Stability of Adsorbed Proteins

od Sharma, Sumit, Berne, B.J., Kumar, Sanat K.
Wydane 2010

Water’s role in the force-induced unfolding of ubiquitin

od Li, Jingyuan, Fernandez, Julio M., Berne, B. J.
Wydane 2010

Ligand binding to protein-binding pockets with wet and dry regions

od Wang, Lingle, Berne, B. J., Friesner, R. A.
Wydane 2011

Hydrophobic interactions in model enclosures from small to large length scales: non-additivity in explicit and implicit solvent models

od Wang, Lingle, Friesner, Richard A., Berne, B. J.
Wydane 2010

Competition of electrostatic and hydrophobic interactions between small hydrophobes and model enclosures

od Wang, Lingle, Friesner, Richard A., Berne, B.J.
Wydane 2010

Replica Exchange with Solute Scaling: A more efficient version of Replica Exchange with Solute Tempering (REST2)

od Wang, Lingle, Friesner, Richard A., Berne, B.J.
Wydane 2011

On achieving high accuracy and reliability in the calculation of relative protein–ligand binding affinities

od Wang, Lingle, Berne, B. J., Friesner, Richard A.
Wydane 2012

How hydrophobic drying forces impact the kinetics of molecular recognition

od Mondal, Jagannath, Morrone, Joseph A., Berne, B. J.
Wydane 2013