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On achieving high accuracy and reliability in the calculation of relative protein–ligand binding affinities

We apply a free energy perturbation simulation method, free energy perturbation/replica exchange with solute tempering, to two modifications of protein–ligand complexes that lead to significant conformational changes, the first in the protein and the second in the ligand. The approach is shown to fa...

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Detalhes bibliográficos
Main Authors: Wang, Lingle, Berne, B. J., Friesner, Richard A.
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2012
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3277581/
https://ncbi.nlm.nih.gov/pubmed/22308365
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.1114017109
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