isomiR-SEA: an RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation

Por Urgese, Gianvito, Paciello, Giulia, Acquaviva, Andrea, Ficarra, Elisa
Publicado no BMC Bioinformatics (2016)

miREE: miRNA recognition elements ensemble

Por Reyes-Herrera, Paula H, Ficarra, Elisa, Acquaviva, Andrea, Macii, Enrico
Publicado em 2011

VDJSeq-Solver: In Silico V(D)J Recombination Detection Tool

Por Paciello, Giulia, Acquaviva, Andrea, Pighi, Chiara, Ferrarini, Alberto, Macii, Enrico, Zamo’, Alberto, Ficarra, Elisa
Publicado no PLoS One (2015)

Loss of AXIN1 drives acquired resistance to WNT pathway blockade in colorectal cancer cells carrying RSPO3 fusions

Por Picco, Gabriele, Petti, Consalvo, Centonze, Alessia, Torchiaro, Erica, Crisafulli, Giovanni, Novara, Luca, Acquaviva, Andrea, Bardelli, Alberto, Medico, Enzo
Publicado no EMBO Mol Med (2017)

Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer

Por Abate, Francesco, Zairis, Sakellarios, Ficarra, Elisa, Acquaviva, Andrea, Wiggins, Chris H, Frattini, Veronique, Lasorella, Anna, Iavarone, Antonio, Inghirami, Giorgio, Rabadan, Raul
Publicado no BMC Syst Biol (2014)

A novel Patient Derived Tumorgraft model with TRAF1-ALK Anaplastic Large Cell Lymphoma translocation

Por Abate, Francesco, Todaro, Maria, van der Krogt, Jo-Anne, Boi, Michela, Landra, Indira, Machiorlatti, Rodolfo, Tabbo’, Fabrizio, Messana, Katia, Barreca, Antonella, Novero, Domenico, Gaudiano, Marcello, Aliberti, Sabrina, Di Giacomo, Filomena, Tousseyn, Thomas, Lasorsa, Elena, Crescenzo, Ramona, Bessone, Luca, Ficarra, Elisa, Acquaviva, Andrea, Rinaldi, Andrea, Ponzoni, Maurilio, Longo, Dario Livio, Aime, Silvio, Cheng, Mangeng, Ruggeri, Bruce, Piccaluga, Pier Paolo, Pileri, Stefano, Tiacci, Enrico, Falini, Brunangelo, Pera-Gresely, Benet, Cerchietti, Leandro, Iqbal, Javeed, Chan, Wing C, Shultz, Leonard D., Kwee, Ivo, Piva, Roberto, Wlodarska, Iwona, Rabadan, Raul, Bertoni, Francesco, Inghirami, Giorgio
Publicado no Leukemia (2014)