The healthy human microbiome

Por Lloyd-Price, Jason, Abu-Ali, Galeb, Huttenhower, Curtis
Publicado no Genome Med (2016)

Genomic diversity of pathogenic Escherichia coli of the EHEC 2 clonal complex

Por Abu-Ali, Galeb S, Lacher, David W, Wick, Lukas M, Qi, Weihong, Whittam, Thomas S
Publicado em 2009

Differences in adherence and virulence gene expression between two outbreak strains of enterohaemorrhagic Escherichia coli O157 : H7

Por Abu-Ali, Galeb S., Ouellette, Lindsey M., Henderson, Scott T., Whittam, Thomas S., Manning, Shannon D.
Publicado em 2010

“Fecal microbiome in epidemiologic studies” - Letter

Por Drew, David A., Lochhead, Paul, Abu-Ali, Galeb, Chan, Andrew T., Huttenhower, Curtis, Izard, Jacques
Publicado no Cancer Epidemiol Biomarkers Prev (2016)

Shiga toxin 2 overexpression in Escherichia coli O157:H7 strains associated with severe human disease

Por Neupane, Mahesh, Abu-Ali, Galeb S., Mitra, Avishek, Lacher, David W., Manning, Shannon D., Riordan, James T.
Publicado em 2011

Increased Adherence and Expression of Virulence Genes in a Lineage of Escherichia coli O157:H7 Commonly Associated with Human Infections

Por Abu-Ali, Galeb S., Ouellette, Lindsey M., Henderson, Scott T., Lacher, David W., Riordan, James T., Whittam, Thomas S., Manning, Shannon D.
Publicado em 2010

Sequencing and beyond: integrating molecular ‘omics for microbial community profiling

Por Franzosa, Eric A., Hsu, Tiffany, Sirota-Madi, Alexandra, Shafquat, Afrah, Abu-Ali, Galeb, Morgan, Xochitl C., Huttenhower, Curtis
Publicado no Nat Rev Microbiol (2015)

Correlation between In Vivo Biofilm Formation and Virulence Gene Expression in Escherichia coli O104:H4

Por Safadi, Rim Al, Abu-Ali, Galeb S., Sloup, Rudolph E., Rudrik, James T., Waters, Christopher M., Eaton, Kathryn A., Manning, Shannon D.
Publicado em 2012

Pathogenesis of Renal Disease Due to Enterohemorrhagic Escherichia coli in Germ-Free Mice

Por Eaton, Kathryn A., Friedman, David I., Francis, Gayle J., Tyler, Jessica S., Young, Vincent B., Haeger, Jennifer, Abu-Ali, Galeb, Whittam, Thomas S.
Publicado em 2008

bioBakery: a meta’omic analysis environment

Por McIver, Lauren J, Abu-Ali, Galeb, Franzosa, Eric A, Schwager, Randall, Morgan, Xochitl C, Waldron, Levi, Segata, Nicola, Huttenhower, Curtis
Publicado no Bioinformatics (2018)

The Microbiome Regulates Pulmonary Responses to Ozone in Mice

Por Cho, Youngji, Abu-Ali, Galeb, Tashiro, Hiroki, Kasahara, David I., Brown, Traci A., Brand, Jeffrey D., Mathews, Joel A., Huttenhower, Curtis, Shore, Stephanie A.
Publicado no Am J Respir Cell Mol Biol (2018)

Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium

Por Sinha, Rashmi, Abu-Ali, Galeb, Vogtmann, Emily, Fodor, Anthony A., Ren, Boyu, Amir, Amnon, Schwager, Emma, Crabtree, Jonathan, Ma, Siyuan, Abnet, Christian C., Knight, Rob, White, Owen, Huttenhower, Curtis
Publicado no Nat Biotechnol (2017)

Urban Transit System Microbial Communities Differ by Surface Type and Interaction with Humans and the Environment

Por Hsu, Tiffany, Joice, Regina, Vallarino, Jose, Abu-Ali, Galeb, Hartmann, Erica M., Shafquat, Afrah, DuLong, Casey, Baranowski, Catherine, Gevers, Dirk, Green, Jessica L., Morgan, Xochitl C., Spengler, John D., Huttenhower, Curtis
Publicado no mSystems (2016)

Fluoride Depletes Acidogenic Taxa in Oral but Not Gut Microbial Communities in Mice

Por Yasuda, Koji, Hsu, Tiffany, Gallini, Carey A., Mclver, Lauren J., Schwager, Emma, Shi, Andy, DuLong, Casey R., Schwager, Randall N., Abu-Ali, Galeb S., Franzosa, Eric A., Garrett, Wendy S., Huttenhower, Curtis, Morgan, Xochitl C.
Publicado no mSystems (2017)

Stability of the human faecal microbiome in a cohort of adult men

Por Mehta, Raaj S., Abu-Ali, Galeb S., Drew, David A., Lloyd-Price, Jason, Subramanian, Ayshwarya, Lochhead, Paul, Joshi, Amit D., Ivey, Kerry L., Khalili, Hamed, Brown, Gordon T., DuLong, Casey, Song, Mingyang, Nguyen, Long H., Mallick, Himel, Rimm, Eric B., Izard, Jacques, Huttenhower, Curtis, Chan, Andrew T.
Publicado no Nat Microbiol (2018)

Lactobacillus-Deficient Cervicovaginal Bacterial Communities are Associated with Increased HIV Acquisition in Young South African Women

Por Gosmann, Christina, Anahtar, Melis N., Handley, Scott A., Farcasanu, Mara, Abu-Ali, Galeb, Bowman, Brittany A., Padavattan, Nikita, Desai, Chandni, Droit, Lindsay, Moodley, Amber, Dong, Mary, Chen, Yuezhou, Ismail, Nasreen, Ndung’u, Thumbi, Ghebremichael, Musie S., Wesemann, Duane R., Mitchell, Caroline, Dong, Krista L., Huttenhower, Curtis, Walker, Bruce D., Virgin, Herbert W., Kwon, Douglas S.
Publicado no Immunity (2017)