نتائج البحث - ((java algorithm) or (((data algorithm) or (fast algorithms))))

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1

BioDIFF: An Effective Fast Change Detection Algorithm for Biological Annotations

BioDIFF: An Effective Fast Change Detection Algorithm for Biological Annotations

بواسطة Song, Yang, Bhowmick, Sourav S., Dewey, C. Forbes
الحاوية / القاعدة Advances in Databases: Concepts, Systems and Applications (2007)

“... changes to the underlying biological data sources. In this paper, we present an algorithm called BioDiff...”
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Artigo

2

Open Data Structures: An Introduction

Open Data Structures: An Introduction

بواسطة Pat Morin
الحاوية / القاعدة OPEL (Open Paths to Enriched Learning) (2013)

الموضوعات: “...algorithms...”
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Livro

3

DBS: a fast and informative segmentation algorithm for DNA copy number analysis

DBS: a fast and informative segmentation algorithm for DNA copy number analysis

بواسطة Ruan, Jun, Liu, Zhen, Sun, Ming, Wang, Yue, Yue, Junqiu, Yu, Guoqiang
الحاوية / القاعدة BMC Bioinformatics (2019)

“... and efficient segmentation algorithms are required when characterizing high density CNAs data. RESULTS: A fast...”
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Artigo

4

DBS: a fast and informative segmentation algorithm for DNA copy number analysis

DBS: a fast and informative segmentation algorithm for DNA copy number analysis

بواسطة Jun Ruan, Zhen Liu, Ming Sun, Yue Wang, Junqiu Yue, Guoqiang Yu
منشور في 2019-01-01

“... and efficient segmentation algorithms are required when characterizing high density CNAs data. Results A fast...”
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Artigo

5

The Index-Based Subgraph Matching Algorithm (ISMA): Fast Subgraph Enumeration in Large Networks Using Optimized Search Trees

The Index-Based Subgraph Matching Algorithm (ISMA): Fast Subgraph Enumeration in Large Networks Using Optimized Search Trees

بواسطة Demeyer, Sofie, Michoel, Tom, Fostier, Jan, Audenaert, Pieter, Pickavet, Mario, Demeester, Piet
منشور في 2013

“...Subgraph matching algorithms are designed to find all instances of predefined subgraphs in a large...”
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Artigo

6

A highly efficient multi-core algorithm for clustering extremely large datasets

A highly efficient multi-core algorithm for clustering extremely large datasets

بواسطة Kraus, Johann M, Kestler, Hans A
منشور في 2010

“.... This demand is likely to increase. Standard algorithms for analyzing data, such as cluster algorithms, need...”
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Artigo

7

MET: a Java package for fast molecule equivalence testing

MET: a Java package for fast molecule equivalence testing

بواسطة Schüler, Jördis-Ann, Rechner, Steffen, Müller-Hannemann, Matthias
الحاوية / القاعدة J Cheminform (2020)

“... on extensive computational experiments, we show that our algorithm is significantly faster than existing...”
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Artigo

8

Trie-based Rule Processing for Clinical NLP: a use-case study of n-trie, making the ConText algorithm more efficient and scalable

Trie-based Rule Processing for Clinical NLP: a use-case study of n-trie, making the ConText algorithm more efficient and scalable

بواسطة Shi, Jianlin, Hurdle, John F.
الحاوية / القاعدة J Biomed Inform (2018)

“... in an implementation (called FastContext) of the ConText algorithm and compared its processing speed and accuracy...”
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Artigo

9

BatMass: a Java software platform for LC/MS data visualization in proteomics and metabolomics

BatMass: a Java software platform for LC/MS data visualization in proteomics and metabolomics

بواسطة Avtonomov, Dmitry, Raskind, Alexander, Nesvizhskii, Alexey I.
الحاوية / القاعدة J Proteome Res (2016)

“... data through its fast visualization capabilities. It also serves as a testbed for developers of LC/MS...”
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Artigo

10

MutScan: fast detection and visualization of target mutations by scanning FASTQ data

MutScan: fast detection and visualization of target mutations by scanning FASTQ data

بواسطة Chen, Shifu, Huang, Tanxiao, Wen, Tiexiang, Li, Hong, Xu, Mingyan, Gu, Jia
الحاوية / القاعدة BMC Bioinformatics (2018)

“... such as HTML and JavaScript. Algorithms such as rolling hash and bloom filter are applied to accelerate...”
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Artigo

11

GC4S: A bioinformatics-oriented Java software library of reusable graphical user interface components

GC4S: A bioinformatics-oriented Java software library of reusable graphical user interface components

بواسطة López-Fernández, Hugo, Reboiro-Jato, Miguel, Glez-Peña, Daniel, Laza, Rosalía, Pavón, Reyes, Fdez-Riverola, Florentino
الحاوية / القاعدة PLoS One (2018)

“... and fast implementations of different data analysis algorithms, these software applications should also...”
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Artigo

12

FastPval: a fast and memory efficient program to calculate very low P-values from empirical distribution

FastPval: a fast and memory efficient program to calculate very low P-values from empirical distribution

بواسطة Li, Mulin Jun, Sham, Pak Chung, Wang, Junwen
منشور في 2010

“..., the java GUI and source code, and the java web start server with example data and introduction...”
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Artigo

13

Genometa--a fast and accurate classifier for short metagenomic shotgun reads.

Genometa--a fast and accurate classifier for short metagenomic shotgun reads.

بواسطة Colin F Davenport, Jens Neugebauer, Nils Beckmann, Benedikt Friedrich, Burim Kameri, Svea Kokott, Malte Paetow, Björn Siekmann, Matthias Wieding-Drewes, Markus Wienhöfer, Stefan Wolf, Burkhard Tümmler, Volker Ahlers, Frauke Sprengel
منشور في 2012-01-01

“...Metagenomic studies use high-throughput sequence data to investigate microbial communities in situ...”
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Artigo

14

Genometa - A Fast and Accurate Classifier for Short Metagenomic Shotgun Reads

Genometa - A Fast and Accurate Classifier for Short Metagenomic Shotgun Reads

بواسطة Davenport, Colin F., Neugebauer, Jens, Beckmann, Nils, Friedrich, Benedikt, Kameri, Burim, Kokott, Svea, Paetow, Malte, Siekmann, Björn, Wieding-Drewes, Matthias, Wienhöfer, Markus, Wolf, Stefan, Tümmler, Burkhard, Ahlers, Volker, Sprengel, Frauke
منشور في 2012

“...SUMMARY: Metagenomic studies use high-throughput sequence data to investigate microbial communities...”
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Artigo

15

Deconvolution of Two-Dimensional NMR Spectra by Fast Maximum Likelihood Reconstruction: Application to Quantitative Metabolomics

Deconvolution of Two-Dimensional NMR Spectra by Fast Maximum Likelihood Reconstruction: Application to Quantitative Metabolomics

بواسطة Chylla, Roger A., Hu, Kaifeng, Ellinger, James J., Markley, John L.
منشور في 2011

“...[Image: see text] We have developed an algorithm called fast maximum likelihood reconstruction...”
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Artigo

16

SmartPhase: Accurate and fast phasing of heterozygous variant pairs for genetic diagnosis of rare diseases

SmartPhase: Accurate and fast phasing of heterozygous variant pairs for genetic diagnosis of rare diseases

بواسطة Hager, Paul, Mewes, Hans-Werner, Rohlfs, Meino, Klein, Christoph, Jeske, Tim
الحاوية / القاعدة PLoS Comput Biol (2020)

“.... The phasing algorithm of SmartPhase creates haplotypes using both parental genotype information and reads...”
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Artigo

17

ROMA: Representation and Quantification of Module Activity from Target Expression Data

ROMA: Representation and Quantification of Module Activity from Target Expression Data

بواسطة Martignetti, Loredana, Calzone, Laurence, Bonnet, Eric, Barillot, Emmanuel, Zinovyev, Andrei
الحاوية / القاعدة Front Genet (2016)

“...) Java software, designed for fast and robust computation of the activity of gene sets (or modules...”
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Artigo

18

TraceSpecks: A Software for Automated Idealization of Noisy Patch-Clamp and Imaging Data

TraceSpecks: A Software for Automated Idealization of Noisy Patch-Clamp and Imaging Data

بواسطة Shah, Syed Islamuddin, Demuro, Angelo, Mak, Don-On Daniel, Parker, Ian, Pearson, John E., Ullah, Ghanim
الحاوية / القاعدة Biophys J (2018)

“... graphical interface and test the algorithm on both synthetic and experimental data from the patch-clamp...”
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Artigo

19

miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data

miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data

بواسطة An, Jiyuan, Lai, John, Lehman, Melanie L., Nelson, Colleen C.
منشور في 2013

“... strategies to identify precursor miRNAs. miRDeep* has a user-friendly graphic interface and accepts raw data...”
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Artigo

20

C-State: an interactive web app for simultaneous multi-gene visualization and comparative epigenetic pattern search

C-State: an interactive web app for simultaneous multi-gene visualization and comparative epigenetic pattern search

بواسطة Divya Tej Sowpati, Surabhi Srivastava, Jyotsna Dhawan, Rakesh K Mishra
منشور في 2017-09-01

الموضوعات: “...JavaScript...”
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Artigo

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