STRONG: metagenomics strain resolution on assembly graphs

We introduce STrain Resolution ON assembly Graphs (STRONG), which identifies strains de novo, from multiple metagenome samples. STRONG performs coassembly, and binning into metagenome assembled genomes (MAGs), and stores the coassembly graph prior to variant simplification. This enables the subgraph...

詳細記述

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書誌詳細
出版年:Genome Biol
主要な著者: Quince, Christopher, Nurk, Sergey, Raguideau, Sebastien, James, Robert, Soyer, Orkun S., Summers, J. Kimberly, Limasset, Antoine, Eren, A. Murat, Chikhi, Rayan, Darling, Aaron E.
フォーマット: Artigo
言語:Inglês
出版事項: BioMed Central 2021
主題:
Method
オンライン･アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC8311964/
https://ncbi.nlm.nih.gov/pubmed/34311761
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-021-02419-7
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