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STACAS: Sub-Type Anchor Correction for Alignment in Seurat to integrate single-cell RNA-seq data

SUMMARY: STACAS is a computational method for the identification of integration anchors in the Seurat environment, optimized for the integration of single-cell (sc) RNA-seq datasets that share only a subset of cell types. We demonstrate that by (i) correcting batch effects while preserving relevant...

詳細記述

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書誌詳細
出版年:Bioinformatics
主要な著者: Andreatta, Massimo, Carmona, Santiago J
フォーマット: Artigo
言語:Inglês
出版事項: Oxford University Press 2020
主題:
オンライン・アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC8098019/
https://ncbi.nlm.nih.gov/pubmed/32845323
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa755
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