STACAS: Sub-Type Anchor Correction for Alignment in Seurat to integrate single-cell RNA-seq data

מאת Andreatta, Massimo, Carmona, Santiago J
הוצא לאור ב Bioinformatics (2020)

UCell: Robust and scalable single-cell gene signature scoring

מאת Andreatta, Massimo, Carmona, Santiago J.
הוצא לאור ב Comput Struct Biotechnol J (2021)

TcSNP: a database of genetic variation in Trypanosoma cruzi

מאת Ackermann, Alejandro A., Carmona, Santiago J., Agüero, Fernán
יצא לאור 2009

Characterization of Toxoplasma gondii subtelomeric-like regions: identification of a long-range compositional bias that is also associated with gene-poor regions

מאת Dalmasso, María C, Carmona, Santiago J, Angel, Sergio O, Agüero, Fernán
יצא לאור 2014

Deciphering the transcriptomic landscape of tumor-infiltrating CD8 lymphocytes in B16 melanoma tumors with single-cell RNA-Seq

מאת Carmona, Santiago J., Siddiqui, Imran, Bilous, Mariia, Held, Werner, Gfeller, David
הוצא לאור ב Oncoimmunology (2020)

Genome-wide analysis of 3′-untranslated regions supports the existence of post-transcriptional regulons controlling gene expression in trypanosomes

מאת De Gaudenzi, Javier G., Carmona, Santiago J., Agüero, Fernán, Frasch, Alberto C.
יצא לאור 2013

Diagnostic Peptide Discovery: Prioritization of Pathogen Diagnostic Markers Using Multiple Features

מאת Carmona, Santiago J., Sartor, Paula A., Leguizamón, María S., Campetella, Oscar E., Agüero, Fernán
יצא לאור 2012

Interpretation of T cell states from single-cell transcriptomics data using reference atlases

מאת Andreatta, Massimo, Corria-Osorio, Jesus, Müller, Sören, Cubas, Rafael, Coukos, George, Carmona, Santiago J.
הוצא לאור ב Nat Commun (2021)

APRANK: Computational Prioritization of Antigenic Proteins and Peptides From Complete Pathogen Proteomes

מאת Ricci, Alejandro D., Brunner, Mauricio, Ramoa, Diego, Carmona, Santiago J., Nielsen, Morten, Agüero, Fernán
הוצא לאור ב Front Immunol (2021)

High-resolution profiling of linear B-cell epitopes from mucin-associated surface proteins (MASPs) of Trypanosoma cruzi during human infections

מאת Durante, Ignacio M., La Spina, Pablo E., Carmona, Santiago J., Agüero, Fernán, Buscaglia, Carlos A.
הוצא לאור ב PLoS Negl Trop Dis (2017)

Enhanced Phenotype Definition for Precision Isolation of Precursor Exhausted Tumor-Infiltrating CD8 T Cells

מאת Martinez-Usatorre, Amaia, Carmona, Santiago J., Godfroid, Céline, Yacoub Maroun, Céline, Labiano, Sara, Romero, Pedro
הוצא לאור ב Front Immunol (2020)

Single-cell transcriptome analysis of fish immune cells provides insight into the evolution of vertebrate immune cell types

מאת Carmona, Santiago J., Teichmann, Sarah A., Ferreira, Lauren, Macaulay, Iain C., Stubbington, Michael J.T., Cvejic, Ana, Gfeller, David
הוצא לאור ב Genome Res (2017)

Next-generation ELISA diagnostic assay for Chagas Disease based on the combination of short peptidic epitopes

מאת Mucci, Juan, Carmona, Santiago J., Volcovich, Romina, Altcheh, Jaime, Bracamonte, Estefanía, Marco, Jorge D., Nielsen, Morten, Buscaglia, Carlos A., Agüero, Fernán
הוצא לאור ב PLoS Negl Trop Dis (2017)

TDR Targets: a chemogenomics resource for neglected diseases

מאת Magariños, María P., Carmona, Santiago J., Crowther, Gregory J., Ralph, Stuart A., Roos, David S., Shanmugam, Dhanasekaran, Van Voorhis, Wesley C., Agüero, Fernán
יצא לאור 2012

Mapping Antigenic Motifs in the Trypomastigote Small Surface Antigen from Trypanosoma cruzi

מאת Balouz, Virginia, Cámara, María de los Milagros, Cánepa, Gaspar E., Carmona, Santiago J., Volcovich, Romina, Gonzalez, Nicolás, Altcheh, Jaime, Agüero, Fernán, Buscaglia, Carlos A.
הוצא לאור ב Clin Vaccine Immunol (2015)

Towards High-throughput Immunomics for Infectious Diseases: Use of Next-generation Peptide Microarrays for Rapid Discovery and Mapping of Antigenic Determinants

מאת Carmona, Santiago J., Nielsen, Morten, Schafer-Nielsen, Claus, Mucci, Juan, Altcheh, Jaime, Balouz, Virginia, Tekiel, Valeria, Frasch, Alberto C., Campetella, Oscar, Buscaglia, Carlos A., Agüero, Fernán
הוצא לאור ב Mol Cell Proteomics (2015)

Identification of Attractive Drug Targets in Neglected-Disease Pathogens Using an In Silico Approach

מאת Crowther, Gregory J., Shanmugam, Dhanasekaran, Carmona, Santiago J., Doyle, Maria A., Hertz-Fowler, Christiane, Berriman, Matthew, Nwaka, Solomon, Ralph, Stuart A., Roos, David S., Van Voorhis, Wesley C., Agüero, Fernán
יצא לאור 2010

Molecular and antigenic characterization of Trypanosoma cruzi TolT proteins

מאת Lobo, Maite, Balouz, Virginia, Melli, Luciano, Carlevaro, Giannina, Cortina, María E., Cámara, María de los Milagros, Cánepa, Gaspar E., Carmona, Santiago J., Altcheh, Jaime, Campetella, Oscar, Ciocchini, Andrés E., Agüero, Fernán, Mucci, Juan, Buscaglia, Carlos A.
הוצא לאור ב PLoS Negl Trop Dis (2019)

Prediction of neo-epitope immunogenicity reveals TCR recognition determinants and provides insight into immunoediting

מאת Schmidt, Julien, Smith, Angela R., Magnin, Morgane, Racle, Julien, Devlin, Jason R., Bobisse, Sara, Cesbron, Julien, Bonnet, Victor, Carmona, Santiago J., Huber, Florian, Ciriello, Giovanni, Speiser, Daniel E., Bassani-Sternberg, Michal, Coukos, George, Baker, Brian M., Harari, Alexandre, Gfeller, David
הוצא לאור ב Cell Rep Med (2021)