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MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata
BACKGROUND: Specialized data structures are required for online algorithms to efficiently handle large sequencing datasets. The counting quotient filter (CQF), a compact hashtable, can efficiently store k-mers with a skewed distribution. RESULT: Here, we present the mixed-counters quotient filter (M...
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| Pubblicato in: | BMC Bioinformatics |
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| Autori principali: | , , |
| Natura: | Artigo |
| Lingua: | Inglês |
| Pubblicazione: |
BioMed Central
2021
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| Soggetti: | |
| Accesso online: | https://ncbi.nlm.nih.gov/pmc/articles/PMC7885209/ https://ncbi.nlm.nih.gov/pubmed/33593271 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-021-03996-x |
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