Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity

The COVID-19 pandemic has led to a rapid accumulation of SARS-CoV-2 genomes, enabling genomic epidemiology on local and global scales. Collections of genomes from resources such as GISAID must be subsampled to enable computationally feasible phylogenetic and other analyses. We present genome-sampler...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:F1000Res
Main Authors: Bolyen, Evan, Dillon, Matthew R., Bokulich, Nicholas A., Ladner, Jason T., Larsen, Brendan B., Hepp, Crystal M., Lemmer, Darrin, Sahl, Jason W., Sanchez, Andrew, Holdgraf, Chris, Sewell, Chris, Choudhury, Aakash G., Stachurski, John, McKay, Matthew, Simard, Anthony, Engelthaler, David M., Worobey, Michael, Keim, Paul, Caporaso, J. Gregory
Format: Artigo
Jezik:Inglês
Izdano: F1000 Research Limited 2020
Teme:
Software Tool Article
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC7814287/
https://ncbi.nlm.nih.gov/pubmed/33500774
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.12688/f1000research.24751.2
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