PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem

MOTIVATION: Recent advances in single-cell sequencing (SCS) offer an unprecedented insight into tumor emergence and evolution. Principled approaches to tumor phylogeny reconstruction via SCS data are typically based on general computational methods for solving an integer linear program, or a constra...

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Dades bibliogràfiques
Publicat a:Bioinformatics
Autors principals: Sadeqi Azer, Erfan, Rashidi Mehrabadi, Farid, Malikić, Salem, Li, Xuan Cindy, Bartok, Osnat, Litchfield, Kevin, Levy, Ronen, Samuels, Yardena, Schäffer, Alejandro A, Gertz, E Michael, Day, Chi-Ping, Pérez-Guijarro, Eva, Marie, Kerrie, Lee, Maxwell P, Merlino, Glenn, Ergun, Funda, Sahinalp, S Cenk
Format: Artigo
Idioma:Inglês
Publicat: Oxford University Press 2020
Matèries:
Genomic Variation Analysis
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7355310/
https://ncbi.nlm.nih.gov/pubmed/32657358
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa464
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