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Fast analysis of scATAC-seq data using a predefined set of genomic regions

Background: Analysis of scATAC-seq data has been recently scaled to thousands of cells. While processing of other types of single cell data was boosted by the implementation of alignment-free techniques, pipelines available to process scATAC-seq data still require large computational resources. We p...

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Detalhes bibliográficos
Publicado no:F1000Res
Main Authors: Giansanti, Valentina, Tang, Ming, Cittaro, Davide
Formato: Artigo
Idioma:Inglês
Publicado em: F1000 Research Limited 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7308914/
https://ncbi.nlm.nih.gov/pubmed/32595951
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.12688/f1000research.22731.2
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