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CHOP: haplotype-aware path indexing in population graphs
The practical use of graph-based reference genomes depends on the ability to align reads to them. Performing substring queries to paths through these graphs lies at the core of this task. The combination of increasing pattern length and encoded variations inevitably leads to a combinatorial explosio...
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| Publié dans: | Genome Biol |
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| Auteurs principaux: | , , , , |
| Format: | Artigo |
| Langue: | Inglês |
| Publié: |
BioMed Central
2020
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| Sujets: | |
| Accès en ligne: | https://ncbi.nlm.nih.gov/pmc/articles/PMC7066762/ https://ncbi.nlm.nih.gov/pubmed/32160922 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-01963-y |
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