Genomic diversity affects the accuracy of bacterial single-nucleotide polymorphism–calling pipelines

BACKGROUND: Accurately identifying single-nucleotide polymorphisms (SNPs) from bacterial sequencing data is an essential requirement for using genomics to track transmission and predict important phenotypes such as antimicrobial resistance. However, most previous performance evaluations of SNP calli...

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Библиографические подробности
Опубликовано в: :Gigascience
Главные авторы: Bush, Stephen J, Foster, Dona, Eyre, David W, Clark, Emily L, De Maio, Nicola, Shaw, Liam P, Stoesser, Nicole, Peto, Tim E A, Crook, Derrick W, Walker, A Sarah
Формат: Artigo
Язык:Inglês
Опубликовано: Oxford University Press 2020
Предметы:
Research
Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC7002876/
https://ncbi.nlm.nih.gov/pubmed/32025702
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/gigascience/giaa007
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