Unique and assay specific features of NOMe-, ATAC- and DNase I-seq data

Chromatin accessibility maps are important for the functional interpretation of the genome. Here, we systematically analysed assay specific differences between DNase I-seq, ATAC-seq and NOMe-seq in a side by side experimental and bioinformatic setup. We observe that most prominent nucleosome deplete...

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Détails bibliographiques
Publié dans:Nucleic Acids Res
Auteurs principaux: Nordström, Karl J V, Schmidt, Florian, Gasparoni, Nina, Salhab, Abdulrahman, Gasparoni, Gilles, Kattler, Kathrin, Müller, Fabian, Ebert, Peter, Costa, Ivan G, Pfeifer, Nico, Lengauer, Thomas, Schulz, Marcel H, Walter, Jörn
Format: Artigo
Langue:Inglês
Publié: Oxford University Press 2019
Sujets:
Gene regulation, Chromatin and Epigenetics
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC6847574/
https://ncbi.nlm.nih.gov/pubmed/31584093
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkz799
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