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ATAC2GRN: optimized ATAC-seq and DNase1-seq pipelines for rapid and accurate genome regulatory network inference

BACKGROUND: Chromatin accessibility profiling assays such as ATAC-seq and DNase1-seq offer the opportunity to rapidly characterize the regulatory state of the genome at a single nucleotide resolution. Optimization of molecular protocols has enabled the molecular biologist to produce next-generation...

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Publicat a:BMC Genomics
Autors principals: Pranzatelli, Thomas J. F., Michael, Drew G., Chiorini, John A.
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2018
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC6069842/
https://ncbi.nlm.nih.gov/pubmed/30064353
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-018-4943-z
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