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TransLiG: a de novo transcriptome assembler that uses line graph iteration

We present TransLiG, a new de novo transcriptome assembler, which is able to integrate the sequence depth and pair-end information into the assembling procedure by phasing paths and iteratively constructing line graphs starting from splicing graphs. TransLiG is shown to be significantly superior to...

Deskribapen osoa

Gorde:
Xehetasun bibliografikoak
Argitaratua izan da:Genome Biol
Egile Nagusiak: Liu, Juntao, Yu, Ting, Mu, Zengchao, Li, Guojun
Formatua: Artigo
Hizkuntza:Inglês
Argitaratua: BioMed Central 2019
Gaiak:
Sarrera elektronikoa:https://ncbi.nlm.nih.gov/pmc/articles/PMC6480747/
https://ncbi.nlm.nih.gov/pubmed/31014374
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-019-1690-7
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